Gene RoseRS_3525 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3525 
Symbol 
ID5210502 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp4416169 
End bp4417026 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content62% 
IMG OID640597120 
ProductHemK family modification methylase 
Protein accessionYP_001277833 
Protein GI148657628 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2890] Methylase of polypeptide chain release factors 
TIGRFAM ID[TIGR00536] HemK family putative methylases
[TIGR03534] protein-(glutamine-N5) methyltransferase, release factor-specific 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.836843 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.984536 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAGGTT CTGCCCTTCG CGTCACGCTT GCCGACGCTA TTGTCTGGGC GGTCGAAACG 
CTGCGTGACG CGAGTGAGAC GCCGCGCCTG GACGCTGAGG TGCTGCTGGC GCATACGCTG
GGATGGTCAC GCGCACGGGT GCTGTCCAGG CTTGAGGAAC CCTTTACCGA CGAATCGCTC
CATCAGTTTC GCACGCTGAT ACTGCGCCGC GCCGCGCGTG AACCGGTCGC CTACCTGGTT
GGGCGGAAAG AGTTCTATGG TCTTGAGTTT GTCGTAGACC GGCGCGTGCT CGTGCCGCGC
CCCGAAACCG AAACGCTGGT CGATGCGGCG CTGGAATGGG CAAAACACCG CCCCGCCCCG
CTCGTGATCG CAGATATCGG TACGGGGAGC GGATGTATCG CTGTCGCGCT GGCAGTTCAC
CTTCCTCAGG CGCATATTTA TGCCATCGAT CTTTCCCGCG ATGCGCTGGC GGTTGCCCGG
CAGAATGTCA TACGTCATCA CGTTGACGCC AGCGTGACGC TTCTGAACGG CGACTTGCTG
GCGCCGTTGC CGCAACCGGT CGATCTGCTG GTCAGTAATC CTCCGTATAC CGTTCTCAAC
GAGGTTGATC CCGGTGTACG CATGCACGAA CCGCACCTGG CGCTCGACGG CGGGAGTGAT
GGTCTTGCGG TCTATCGTCG TTTGTTTGCG GCAGCGCCGT CAGCGCTGCG ACCCGGCGGT
GCACTGATGC TGGAGATTGG CGCAACCCAG GCGCGTGCGG TCGTCGATCT GGCGCGGCAG
GCGTTTCCCG AAGCAGTCAT TCGCGTCCGA CAAGACCTTG CCGGACGTGA TCGAGTGGTG
ATATGCTTTT CCGATTAA
 
Protein sequence
MTGSALRVTL ADAIVWAVET LRDASETPRL DAEVLLAHTL GWSRARVLSR LEEPFTDESL 
HQFRTLILRR AAREPVAYLV GRKEFYGLEF VVDRRVLVPR PETETLVDAA LEWAKHRPAP
LVIADIGTGS GCIAVALAVH LPQAHIYAID LSRDALAVAR QNVIRHHVDA SVTLLNGDLL
APLPQPVDLL VSNPPYTVLN EVDPGVRMHE PHLALDGGSD GLAVYRRLFA AAPSALRPGG
ALMLEIGATQ ARAVVDLARQ AFPEAVIRVR QDLAGRDRVV ICFSD