Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3461 |
Symbol | |
ID | 5210438 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 4341797 |
End bp | 4342411 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640597056 |
Product | GrpE protein |
Protein accession | YP_001277769 |
Protein GI | 148657564 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0576] Molecular chaperone GrpE (heat shock protein) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.704807 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0101104 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGGAAC AATTGCAACC ACGACCGCAC GAAGAACAGC CTGAAACAAC GACTGACGGT CAGGAGGCGA CGACACCTGC AGCTCCTGTT GAAGAGGGCG CAGCGCCTCT GAGCGTCGAG GCGTTACAGG CGCGGATTGC TGAACTGGAG CGTGAAAATG CCGAACTGCG CGACAACTGG TTGCGTGCAG TGGCGGATTA TAAAAACTTT AAGCGGCGCA CCGACCAGGA ACGCGCCGAG TTGATCCGCA GCGCCAGCGC TGCGCTGCTC CTTAAACTGT TGCCGGTGAT GGATGATCTC GAGCGTGCGA TGGCAAGCGT GACGCCCGAG GTTGCCGAAA CCCCCTGGTA TGGCGGGTTC AAACTCATTC CGCAGAAGTT GCAGGCGATC CTTGAAAGTG AGGGGGTTTC CCGCATGCAG ACGGTGGGGG AGCCGTTCGA TCCAAACCGG CACGAGGCAA TTATCTATGA GCCGTCGGAG GATGGCGAGG ATGGCAGGGT GATTGCCGAG TTGCAGCACG GTTATCTGCT GCGCGACCGC GTGTTGCGCC CGGCGATGGT GAAGGTCAGC CAGGGGAAGA AGCAATCGTC AGACTCAGAG ACGCCGCATG GGTAA
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Protein sequence | MSEQLQPRPH EEQPETTTDG QEATTPAAPV EEGAAPLSVE ALQARIAELE RENAELRDNW LRAVADYKNF KRRTDQERAE LIRSASAALL LKLLPVMDDL ERAMASVTPE VAETPWYGGF KLIPQKLQAI LESEGVSRMQ TVGEPFDPNR HEAIIYEPSE DGEDGRVIAE LQHGYLLRDR VLRPAMVKVS QGKKQSSDSE TPHG
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