Gene RoseRS_3461 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3461 
Symbol 
ID5210438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp4341797 
End bp4342411 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content60% 
IMG OID640597056 
ProductGrpE protein 
Protein accessionYP_001277769 
Protein GI148657564 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0576] Molecular chaperone GrpE (heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.704807 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0101104 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGAAC AATTGCAACC ACGACCGCAC GAAGAACAGC CTGAAACAAC GACTGACGGT 
CAGGAGGCGA CGACACCTGC AGCTCCTGTT GAAGAGGGCG CAGCGCCTCT GAGCGTCGAG
GCGTTACAGG CGCGGATTGC TGAACTGGAG CGTGAAAATG CCGAACTGCG CGACAACTGG
TTGCGTGCAG TGGCGGATTA TAAAAACTTT AAGCGGCGCA CCGACCAGGA ACGCGCCGAG
TTGATCCGCA GCGCCAGCGC TGCGCTGCTC CTTAAACTGT TGCCGGTGAT GGATGATCTC
GAGCGTGCGA TGGCAAGCGT GACGCCCGAG GTTGCCGAAA CCCCCTGGTA TGGCGGGTTC
AAACTCATTC CGCAGAAGTT GCAGGCGATC CTTGAAAGTG AGGGGGTTTC CCGCATGCAG
ACGGTGGGGG AGCCGTTCGA TCCAAACCGG CACGAGGCAA TTATCTATGA GCCGTCGGAG
GATGGCGAGG ATGGCAGGGT GATTGCCGAG TTGCAGCACG GTTATCTGCT GCGCGACCGC
GTGTTGCGCC CGGCGATGGT GAAGGTCAGC CAGGGGAAGA AGCAATCGTC AGACTCAGAG
ACGCCGCATG GGTAA
 
Protein sequence
MSEQLQPRPH EEQPETTTDG QEATTPAAPV EEGAAPLSVE ALQARIAELE RENAELRDNW 
LRAVADYKNF KRRTDQERAE LIRSASAALL LKLLPVMDDL ERAMASVTPE VAETPWYGGF
KLIPQKLQAI LESEGVSRMQ TVGEPFDPNR HEAIIYEPSE DGEDGRVIAE LQHGYLLRDR
VLRPAMVKVS QGKKQSSDSE TPHG