Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3419 |
Symbol | |
ID | 5210396 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 4290467 |
End bp | 4292932 |
Gene Length | 2466 bp |
Protein Length | 821 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640597014 |
Product | hypothetical protein |
Protein accession | YP_001277727 |
Protein GI | 148657522 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.319511 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0789128 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGGAT CGCGCTGGCG AAAGATCTTC CGCGACCTGT GGCGCTACAA GGTGCGCACC ATCATTGTTG TGATCTCGAT CGCTGCCGGG GTGAGCGGCG TCGGAACTGT CGCGCACATG TACACACTTA TGTCGCACGA CCTCGAACAG AGTTATGCTG CGGTGCTCCC GGCAAGCGCA ACGTTGTATA CCGACGATTC CTTCGATGAT GAGATGGTGC GCGCAGTACG CCGGCTCCCC GCAGTCGCCG ATGCCGAGGG GCGTCGCAGC ATACTGCTGC GTTTCCGCAC AAGGTCTGAC CGCCCGTGGC AGGTGATCGA ACTCTTCGTC CTGCCCGATG ATGGTGAAAC ACGCATCAGC AAGGTGCGCC CTGAAGAGGT GTTCGAACCC GATCCGAAAT CCTGGCCCCC AGGCGACTGG CCCCCGCCAC GCCGCACCAT CGTCCTCGAA CGCACCTCGC TCCTGGTCGG TTACCTGGGG TTGAGTCAGG CGCGCCTGGG TGACGAGATC ACCGTCGAGA CCGCCGATGG ACGCCTGCGC CAGGTGCGCC TGTCGGGGCT GGCATACGAT TTTGCCCGGA TGCTGGCGAC CTTTACCGGA CGCGCGTATG GCTATGTTGA TCGTGAGACG CTGGAGTGGC TTGGCGGTGC GCCCGGTTAC AATCAACTCT ATCTCCTCGC CGACAACCGC ACTGATGCCG CCTCGGTCCG ACAGGTTGCC GACCAGGTCC GCTCCCATAT GGAACGCGCT GGCGTGCGGG TTGCGCGTGT CGATGTAGCA CGACCGGGAG AACTGCCGCT TCAGAACTAT TTCCAGGCGA TCACCGTCGT GCTCGGATCA CTGGGCGTCC TGGCATTGTT TCTCAGCGTA TTGCTCGTGA CCAATACGAT TGCCGCACTG CTGATCCAGC AAACCCGCCA GATTGGTGTT ATGAAAGCGA TTGGCGCACG TCCCAGGCAG ATCGTCGTCA TCTACGCCAT GTATGCGCTG GTTTTTGGTG TGCTGGCGTT GCCACTGGCG CTACCGGCAT CGCGCGCCGT AACGAAGGCA TTCGTCGATT TCCTCGCCTA CTTCCTCAAT TTCAAGACGG GAACCTTCAC GACACCTGCC GCTGTTATCG GTCTGCAGAT TGGAATGGCG CTGCTGACGC CGGTGCTGGC GGCGCTGGCG CCGGTGATCC ACGCAGCACG GTTGACCGTC CGTGAGGCGA TTGCCGGGTG GAGCGCGGAA CGACGTCGCA GGGGAGACCG TGCTTCATCA AACGAGAGCA AGCCATCTGC GCCACCTGGA GCTTCCCGCT TCATGGCGCT TCTCCCCTCA CCGATTATCC TTGCACTGCG CAATTCACTC CGACGACGTG CACGGCTTGC GCTCACGATC ACAACCCTCA TGCTGGCGAC GGCGATTGTC ATTTCGGTGC TGAGTGTGCG GCGCTCACTC TTCGAGACCC TTGAAGTCAT CCTGGCAGCA TCACAGCACG ACATTCAGGT GACGCTCGTT CGTCCTCATC GGGTTGCACA GGTCGAACGC ATTGCGCAAC AGACGCCCGG CGTCGCAGCG GTAGAGAGTT GGGGCAGCGA TCTGGCATAT CGTTTACGCC CTGATGGCAG TGAAGGACCG GCAATCATTA TTGCAGCGCC GCCAGCCGAT AGCCTGCTGT TTACACCAGA AGTTGTCGAA GGGCGCTGGT TGATCCCCGG CGAGGATCAC GCCCTGATCA TCAACCTCGA CGTACTGCGC TTTGAACCAG ATCTGCGCGT CGGACAAAAC GTGGCGCTGA AAATCGGCAA CCGCACCACA GAGTGGCAGA TCGTCGGCGT CGTGCGCAGT CTGCCCGGCA TTCCAATCAT GTACACCGGT CAACCATATC TGGCGCAGAT CACCAGCACA GTCGGTCAGA CACGCGAGAT CCGGGTGGTT ACCGTCGCTT CCGATCCAGC CACGCAGCAA TGCGTTGCAA CGACACTGCG CGACGCGCTG GAACAGGCAG GAGTCAGCGT TGCAGTTGCA CAAACACGCA CTGAAGAACG CGAACAGGCG GCAACCCTGG TCAATATCAT CATTTCGTTC CTGCTCACCA TGGCAATCCT GCTGGCAACC GTCGGCGGAT TGGGACTTGC AGGCACGTTG AGCCTGAACA TTATCGAACG CACCCGTGAG ATCGGAGTTA TGCGCGCAAT TGGGGCATCG AATACGGCGC TGCACCGTAT CGTCATCAGC GAGGGGGTGG CGATCAGTGT GGCAAGCGCT ATGATCGGCA CGCTGCTTGC TATGCCGCTC GGTTGCCTGC TCAGCAATGC GGTAGGGCTG GCATTTCTGA ACATACCGTT GAATTATCAC TTTGCCCTCG ATAGCGCCGC GCTCTGGATG GTCGCGTCGG TCGCGATTGG AATGGTCGCA AGCCTCTTGC CGGCGCACGC AGCGAGCGGC TTGACGGTGC GCGATGCGCT GGCATATGAT GGATGA
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Protein sequence | MIGSRWRKIF RDLWRYKVRT IIVVISIAAG VSGVGTVAHM YTLMSHDLEQ SYAAVLPASA TLYTDDSFDD EMVRAVRRLP AVADAEGRRS ILLRFRTRSD RPWQVIELFV LPDDGETRIS KVRPEEVFEP DPKSWPPGDW PPPRRTIVLE RTSLLVGYLG LSQARLGDEI TVETADGRLR QVRLSGLAYD FARMLATFTG RAYGYVDRET LEWLGGAPGY NQLYLLADNR TDAASVRQVA DQVRSHMERA GVRVARVDVA RPGELPLQNY FQAITVVLGS LGVLALFLSV LLVTNTIAAL LIQQTRQIGV MKAIGARPRQ IVVIYAMYAL VFGVLALPLA LPASRAVTKA FVDFLAYFLN FKTGTFTTPA AVIGLQIGMA LLTPVLAALA PVIHAARLTV REAIAGWSAE RRRRGDRASS NESKPSAPPG ASRFMALLPS PIILALRNSL RRRARLALTI TTLMLATAIV ISVLSVRRSL FETLEVILAA SQHDIQVTLV RPHRVAQVER IAQQTPGVAA VESWGSDLAY RLRPDGSEGP AIIIAAPPAD SLLFTPEVVE GRWLIPGEDH ALIINLDVLR FEPDLRVGQN VALKIGNRTT EWQIVGVVRS LPGIPIMYTG QPYLAQITST VGQTREIRVV TVASDPATQQ CVATTLRDAL EQAGVSVAVA QTRTEEREQA ATLVNIIISF LLTMAILLAT VGGLGLAGTL SLNIIERTRE IGVMRAIGAS NTALHRIVIS EGVAISVASA MIGTLLAMPL GCLLSNAVGL AFLNIPLNYH FALDSAALWM VASVAIGMVA SLLPAHAASG LTVRDALAYD G
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