Gene RoseRS_3419 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3419 
Symbol 
ID5210396 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp4290467 
End bp4292932 
Gene Length2466 bp 
Protein Length821 aa 
Translation table11 
GC content60% 
IMG OID640597014 
Producthypothetical protein 
Protein accessionYP_001277727 
Protein GI148657522 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4591] ABC-type transport system, involved in lipoprotein release, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.319511 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0789128 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGGAT CGCGCTGGCG AAAGATCTTC CGCGACCTGT GGCGCTACAA GGTGCGCACC 
ATCATTGTTG TGATCTCGAT CGCTGCCGGG GTGAGCGGCG TCGGAACTGT CGCGCACATG
TACACACTTA TGTCGCACGA CCTCGAACAG AGTTATGCTG CGGTGCTCCC GGCAAGCGCA
ACGTTGTATA CCGACGATTC CTTCGATGAT GAGATGGTGC GCGCAGTACG CCGGCTCCCC
GCAGTCGCCG ATGCCGAGGG GCGTCGCAGC ATACTGCTGC GTTTCCGCAC AAGGTCTGAC
CGCCCGTGGC AGGTGATCGA ACTCTTCGTC CTGCCCGATG ATGGTGAAAC ACGCATCAGC
AAGGTGCGCC CTGAAGAGGT GTTCGAACCC GATCCGAAAT CCTGGCCCCC AGGCGACTGG
CCCCCGCCAC GCCGCACCAT CGTCCTCGAA CGCACCTCGC TCCTGGTCGG TTACCTGGGG
TTGAGTCAGG CGCGCCTGGG TGACGAGATC ACCGTCGAGA CCGCCGATGG ACGCCTGCGC
CAGGTGCGCC TGTCGGGGCT GGCATACGAT TTTGCCCGGA TGCTGGCGAC CTTTACCGGA
CGCGCGTATG GCTATGTTGA TCGTGAGACG CTGGAGTGGC TTGGCGGTGC GCCCGGTTAC
AATCAACTCT ATCTCCTCGC CGACAACCGC ACTGATGCCG CCTCGGTCCG ACAGGTTGCC
GACCAGGTCC GCTCCCATAT GGAACGCGCT GGCGTGCGGG TTGCGCGTGT CGATGTAGCA
CGACCGGGAG AACTGCCGCT TCAGAACTAT TTCCAGGCGA TCACCGTCGT GCTCGGATCA
CTGGGCGTCC TGGCATTGTT TCTCAGCGTA TTGCTCGTGA CCAATACGAT TGCCGCACTG
CTGATCCAGC AAACCCGCCA GATTGGTGTT ATGAAAGCGA TTGGCGCACG TCCCAGGCAG
ATCGTCGTCA TCTACGCCAT GTATGCGCTG GTTTTTGGTG TGCTGGCGTT GCCACTGGCG
CTACCGGCAT CGCGCGCCGT AACGAAGGCA TTCGTCGATT TCCTCGCCTA CTTCCTCAAT
TTCAAGACGG GAACCTTCAC GACACCTGCC GCTGTTATCG GTCTGCAGAT TGGAATGGCG
CTGCTGACGC CGGTGCTGGC GGCGCTGGCG CCGGTGATCC ACGCAGCACG GTTGACCGTC
CGTGAGGCGA TTGCCGGGTG GAGCGCGGAA CGACGTCGCA GGGGAGACCG TGCTTCATCA
AACGAGAGCA AGCCATCTGC GCCACCTGGA GCTTCCCGCT TCATGGCGCT TCTCCCCTCA
CCGATTATCC TTGCACTGCG CAATTCACTC CGACGACGTG CACGGCTTGC GCTCACGATC
ACAACCCTCA TGCTGGCGAC GGCGATTGTC ATTTCGGTGC TGAGTGTGCG GCGCTCACTC
TTCGAGACCC TTGAAGTCAT CCTGGCAGCA TCACAGCACG ACATTCAGGT GACGCTCGTT
CGTCCTCATC GGGTTGCACA GGTCGAACGC ATTGCGCAAC AGACGCCCGG CGTCGCAGCG
GTAGAGAGTT GGGGCAGCGA TCTGGCATAT CGTTTACGCC CTGATGGCAG TGAAGGACCG
GCAATCATTA TTGCAGCGCC GCCAGCCGAT AGCCTGCTGT TTACACCAGA AGTTGTCGAA
GGGCGCTGGT TGATCCCCGG CGAGGATCAC GCCCTGATCA TCAACCTCGA CGTACTGCGC
TTTGAACCAG ATCTGCGCGT CGGACAAAAC GTGGCGCTGA AAATCGGCAA CCGCACCACA
GAGTGGCAGA TCGTCGGCGT CGTGCGCAGT CTGCCCGGCA TTCCAATCAT GTACACCGGT
CAACCATATC TGGCGCAGAT CACCAGCACA GTCGGTCAGA CACGCGAGAT CCGGGTGGTT
ACCGTCGCTT CCGATCCAGC CACGCAGCAA TGCGTTGCAA CGACACTGCG CGACGCGCTG
GAACAGGCAG GAGTCAGCGT TGCAGTTGCA CAAACACGCA CTGAAGAACG CGAACAGGCG
GCAACCCTGG TCAATATCAT CATTTCGTTC CTGCTCACCA TGGCAATCCT GCTGGCAACC
GTCGGCGGAT TGGGACTTGC AGGCACGTTG AGCCTGAACA TTATCGAACG CACCCGTGAG
ATCGGAGTTA TGCGCGCAAT TGGGGCATCG AATACGGCGC TGCACCGTAT CGTCATCAGC
GAGGGGGTGG CGATCAGTGT GGCAAGCGCT ATGATCGGCA CGCTGCTTGC TATGCCGCTC
GGTTGCCTGC TCAGCAATGC GGTAGGGCTG GCATTTCTGA ACATACCGTT GAATTATCAC
TTTGCCCTCG ATAGCGCCGC GCTCTGGATG GTCGCGTCGG TCGCGATTGG AATGGTCGCA
AGCCTCTTGC CGGCGCACGC AGCGAGCGGC TTGACGGTGC GCGATGCGCT GGCATATGAT
GGATGA
 
Protein sequence
MIGSRWRKIF RDLWRYKVRT IIVVISIAAG VSGVGTVAHM YTLMSHDLEQ SYAAVLPASA 
TLYTDDSFDD EMVRAVRRLP AVADAEGRRS ILLRFRTRSD RPWQVIELFV LPDDGETRIS
KVRPEEVFEP DPKSWPPGDW PPPRRTIVLE RTSLLVGYLG LSQARLGDEI TVETADGRLR
QVRLSGLAYD FARMLATFTG RAYGYVDRET LEWLGGAPGY NQLYLLADNR TDAASVRQVA
DQVRSHMERA GVRVARVDVA RPGELPLQNY FQAITVVLGS LGVLALFLSV LLVTNTIAAL
LIQQTRQIGV MKAIGARPRQ IVVIYAMYAL VFGVLALPLA LPASRAVTKA FVDFLAYFLN
FKTGTFTTPA AVIGLQIGMA LLTPVLAALA PVIHAARLTV REAIAGWSAE RRRRGDRASS
NESKPSAPPG ASRFMALLPS PIILALRNSL RRRARLALTI TTLMLATAIV ISVLSVRRSL
FETLEVILAA SQHDIQVTLV RPHRVAQVER IAQQTPGVAA VESWGSDLAY RLRPDGSEGP
AIIIAAPPAD SLLFTPEVVE GRWLIPGEDH ALIINLDVLR FEPDLRVGQN VALKIGNRTT
EWQIVGVVRS LPGIPIMYTG QPYLAQITST VGQTREIRVV TVASDPATQQ CVATTLRDAL
EQAGVSVAVA QTRTEEREQA ATLVNIIISF LLTMAILLAT VGGLGLAGTL SLNIIERTRE
IGVMRAIGAS NTALHRIVIS EGVAISVASA MIGTLLAMPL GCLLSNAVGL AFLNIPLNYH
FALDSAALWM VASVAIGMVA SLLPAHAASG LTVRDALAYD G