Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3409 |
Symbol | |
ID | 5210386 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 4280223 |
End bp | 4280930 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640597004 |
Product | hypothetical protein |
Protein accession | YP_001277717 |
Protein GI | 148657512 |
COG category | [S] Function unknown |
COG ID | [COG4636] Uncharacterized protein conserved in cyanobacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.186244 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.557199 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGACGC TAGAACGACC CGCGCGCGCC CGGCGCGTCC ACTACCCGGA GAGCGACGGC AAGCCGATGG GCGAAACCGA CCTGCACCGC GACCTGATGA CCGACCTGAT CTTTGCGCTG AAGTGGTTTC TGCGTTCGAC GCAGGCGTAT GTGGCGGGGA ACCTGTTCAT CTACTATGAG GAAGGCAATC CGCGCGCGGC AGTAGCGCCG GACGTGTTTG TGGTGTTGGG GGTGGAGCAG CGGCGGCGGC GCATCTTTCA GACGTGGCGC GAGGGGGGGC GCGCGCCGGA CGTGGTGATC GAGATCACGT CGAAGAAGAC GCGCAAAGAC GACCGCGAGC GGAAGCCAGC GATCTATGCG GCGCTGGGGG TGCGGGAGTA TTTCATCTTC GACCCGCACG GGGAGTATCT TGAGCCGCCG TTGCAGGGGT ATCGCCTGGT GCAGGGGGTG TATGAACCGA TAGCGACCGA CCCGCTGCGG AGCGAGGTGT TGAACCTGGA GTTGCGGCAG GAGGACGGGA TGCTGCGGTT GTACCATCCG CAGACCGGCG AGCGCCTGCC GACGTCCGAC GAGGAAGCGC AGGCGCGACG TGCTGCGGAG GCGCGCGCAG CGCAACTGGA GGCGGAAGTG GCGCGCCTGC GCGCCGAACT CGCGCGGCTT GCCGGTGCGC AGGCGGCATT AGAATCATCG TCATCGGAGG AAGCGTAG
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Protein sequence | MTTLERPARA RRVHYPESDG KPMGETDLHR DLMTDLIFAL KWFLRSTQAY VAGNLFIYYE EGNPRAAVAP DVFVVLGVEQ RRRRIFQTWR EGGRAPDVVI EITSKKTRKD DRERKPAIYA ALGVREYFIF DPHGEYLEPP LQGYRLVQGV YEPIATDPLR SEVLNLELRQ EDGMLRLYHP QTGERLPTSD EEAQARRAAE ARAAQLEAEV ARLRAELARL AGAQAALESS SSEEA
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