| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3396 |
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| Symbol | sucA |
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| ID | 5210373 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 4268190 |
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| End bp | 4271045 |
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| Gene Length | 2856 bp |
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| Protein Length | 951 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640596991 |
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| Product | 2-oxoglutarate dehydrogenase E1 component |
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| Protein accession | YP_001277704 |
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| Protein GI | 148657499 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0567] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes |
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| TIGRFAM ID | [TIGR00239] 2-oxoglutarate dehydrogenase, E1 component |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.177532 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.434505 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTTCAG ATACACGTTT TCACGGCCCG AACGCCGGGT ATGTGATCGA ACTCTACGAA
CGGTATCGCA CCGATCCCGC ATCGGTCGAT CCGGAAACGC GCGCCTTCTT TGCGCAGTGG
TCGCCGGAAG AGGCGTTGCC GACAGCGACG CCTGCCCCCG CAATCCCTGT GACCATCGAC
CTTTCGACGA CGCCGGACAT TGACATGTCC AAAGCGCACA TTGGACCAAC ATCGCCAATC
GATGTCACCC ATACCGTCGC TGCCGCCCGT CTCATTCGCT ATATCCGCGA ACTGGGGCAT
CTGGCGGCGC GGATCGATCC GCTTGGCCGC GATCCTCCCG GCGATCCAGG TCTCGATGCC
GCGATCCACG ATGTCAACGA TGCTGACCTG GCGCTCCTGC CCGCCCATAT TGTGCGTGGA
CCGCTGGCGG CAGAGTCGCG CAATGCGCTC GAAGGGGTTC AGAAACTGCG CTCCGTCTAC
TGCGGCACAA TCGGCTACGA AACGGATCAC GTGCAGGTTT TCGAGGAGCG CGCCTGGATT
CGTGAAGCGG TCGAGAGTCG CCGGTTTTTC TACGGCTTCG ATGCCGTGCG CAAACGTGAA
TTACTCGAGC GTCTGACCGA AGCCGAAACC TTCGAGCGGT ATCTGCACCA GACCTTCGTC
GGGCAGAAAC GGTTTTCGAT CGAAGGATGC GACATGCTGA TCCCAATGCT CGACTCGATC
ATTCGCAATG CGGCGACCGG CGGGGTGCAC GAGGTGGTGA TCGGCATGGC GCACCGCGGG
CGATTGAACG TCCTGGCGCA CATTCTCGGC AAACCATACA GCGCCATTCT CAGCGAGTTT
TTGCTGGCGG GGCGTGATGC AGCGCTTTCG CCGGAAGGAC GCGGCGCGCC TGGCTGGGTT
GGCGATGTGA AATACCACCT CGGCGCCCGC CGTGCATTCC GCGAAGCAGG GATCGAGCAG
ATGCCGATCA CTCTGGCGCC CAACCCCAGC CATCTGGAGT TCGTCAATCC GGTTGTCGCC
GGGCGCGCGC GCGCCGCCCA GGAAACATGC GATCAGGCTG GCGCGCCGCT TCAGAACAGG
CACGCCTCGC TTCCGATCCT CATCCACGGC GATGCTGCGT TTCCGGGGCA GGGGATCGTC
GCCGAGACGC TCAACCTCTC CAACCTCGCC GGATACAGCA CCGGCGGAAC CATTCACATT
ATCGTCAATA ATCAGATCGG GTTCACCACA TCGCCGCACG AGGGACGCTC GACCCTGTAC
GCCAGCGACC TGGCGAAGGG GTTTGAAATC CCAATTGTGC ACGTCAACGC CGATGATGTC
GAAGGGTGTA TTGCGGTTGC GCGCATGGCA TACGCCTATC GCGAACGGTT CGGCAAAGAC
TTTCTGATCG ACCTGGTCGG CTATCGCCGC TGGGGGCATA ACGAGGGCGA TGAACCGGCA
TTTACGCAAC CACGCATGTA TGCCATCATT GCCCGCCATC CGACCGTCCG CGAGCAATGG
GCGTCGAAAC TGATCGCCGA AGGAGTGGTG TCTGCTACCG AAGCGGAGGA GATGGTCAGG
AAGGTGTGGG ACAGGTTGCA ACAGGCGCGC AGCGACGCCG AAGCCCACCC GCACTTTGAG
GAGCCGCCGC CGTTGCCGCC GCCCGGTATT GCGCGTCGTA CCCACACCGC CGTGTCAGCA
GAACGGTTGA CGGCGCTCAA TGAGGCGTTG CTCCAGTGGC CCCCCGGCTT CCGTGTCCAT
CCGCGCCTGG AACGGATGCT GGAACGACGG CGCACTGCGC TCCATATGCC AGGCGCTATC
GATTGGGCGC ACGCCGAGGC GCTGGCGTTT GCATCACTGC TGGAAGAGGG AATTCCGATC
CGCCTGACCG GGCAGGATGT CGAGCGTGGC ACGTTCAGCC AGCGCCACCT GGTGCTGCAC
GATGTGCAAA CCGATGAACG CTGGTGTGCG CTTCAGGCGC TGCCACAGGC GCACGCCTCA
TTTGCAGTCT ACAACAGTCC GCTCTCCGAG GCTGCCGCGC TGGGGTTCGA GTTTGGCTAT
TCGGCGCATA ATCCGCGTGC GCTCGTCATC TGGGAGGCGC AGTTTGGCGA CTTTGCCAAT
GGGGCGCAGG TTATTATCGA CCAGTTTATC GTGTCGGCGC GCAAGAAGTG GGGACAAACG
CCAGCGCTGG TTATGCTGTT GCCCCACGGC TACGAAGGGC AGGGCCCGGA ACATTCCAGC
GCGCGTCTCG AACGCTTTTT GCAACTCGCT GCCGAAGACA ACATTCGCGT GGCGAACTGT
ACGACGGCAG CGCAGTATTT CCACCTGCTG CGACGTCAGG CGCTGCTGCT GAATACTGAC
CCGCGCCCGC TGATCATCAT GACGCCCAAG AGTCTGCTGC GCCACCCGCG TGCTGGCTCG
TCGCTGCACG ACCTCAGTGA GGGGCGTTTC CAGCGTGTGA TCGACGATCC GCAGGCGCGC
GAACGTCCTG CCGATGTGGC GCGCCTGGTG CTCTGCTCCG GCAAAATCTA CGTCGATCTG
CTCAGCGCCA ACGATACGCC GCTGACAAAC GGCGTCGCCG TGGTGCGTCT CGAAGAGTTG
TACTCCTTCC CCGTGGACGA ATTGCGTGCA GTGCTGCAAG GCTATCCTCA CCTTCAGGAA
GTCGTCTGGT TGCAGGAGGA ACCGGAAAAC ATGGGAGCGT GGCGCTACGT CGCGCCACGC
CTGCGCGAAC TGATCGGTCC CGATATGACT CTCAGTTATG TCGGGCGTGC TGAGTCGGCG
AGCCCATCGG AAGGGTCGCT GGCATTGCAC CTGATCGAAC AGCAACGGTT AATCGCCGAA
GCGCTGCGCG CGCCAGCTGT CGAAAAGTAT CGATAA
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| Protein sequence | MPSDTRFHGP NAGYVIELYE RYRTDPASVD PETRAFFAQW SPEEALPTAT PAPAIPVTID
LSTTPDIDMS KAHIGPTSPI DVTHTVAAAR LIRYIRELGH LAARIDPLGR DPPGDPGLDA
AIHDVNDADL ALLPAHIVRG PLAAESRNAL EGVQKLRSVY CGTIGYETDH VQVFEERAWI
REAVESRRFF YGFDAVRKRE LLERLTEAET FERYLHQTFV GQKRFSIEGC DMLIPMLDSI
IRNAATGGVH EVVIGMAHRG RLNVLAHILG KPYSAILSEF LLAGRDAALS PEGRGAPGWV
GDVKYHLGAR RAFREAGIEQ MPITLAPNPS HLEFVNPVVA GRARAAQETC DQAGAPLQNR
HASLPILIHG DAAFPGQGIV AETLNLSNLA GYSTGGTIHI IVNNQIGFTT SPHEGRSTLY
ASDLAKGFEI PIVHVNADDV EGCIAVARMA YAYRERFGKD FLIDLVGYRR WGHNEGDEPA
FTQPRMYAII ARHPTVREQW ASKLIAEGVV SATEAEEMVR KVWDRLQQAR SDAEAHPHFE
EPPPLPPPGI ARRTHTAVSA ERLTALNEAL LQWPPGFRVH PRLERMLERR RTALHMPGAI
DWAHAEALAF ASLLEEGIPI RLTGQDVERG TFSQRHLVLH DVQTDERWCA LQALPQAHAS
FAVYNSPLSE AAALGFEFGY SAHNPRALVI WEAQFGDFAN GAQVIIDQFI VSARKKWGQT
PALVMLLPHG YEGQGPEHSS ARLERFLQLA AEDNIRVANC TTAAQYFHLL RRQALLLNTD
PRPLIIMTPK SLLRHPRAGS SLHDLSEGRF QRVIDDPQAR ERPADVARLV LCSGKIYVDL
LSANDTPLTN GVAVVRLEEL YSFPVDELRA VLQGYPHLQE VVWLQEEPEN MGAWRYVAPR
LRELIGPDMT LSYVGRAESA SPSEGSLALH LIEQQRLIAE ALRAPAVEKY R
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