| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3351 |
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| Symbol | |
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| ID | 5210328 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 4201982 |
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| End bp | 4202989 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640596949 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001277662 |
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| Protein GI | 148657457 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4965] Flp pilus assembly protein TadB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTATTCC AGGCGTTCGC TAGAGGGAAT GGAACGATGG ATGTGCCTGT ATCGCTCGAA
TTTGCGCTGC CCATCGGCGC CGCGCTGCTG GCGAGCCTGG CGAGCCTGAC GCTGCTGTTC
GCAGCGCGCA GCCTGGCAAC GCGCGATACC GGCGTCGATA GCCGGATCAG CGCCTACCTG
GGCGGAGACG ACGTCGCACG CGGTGCAACC CTGAACGATC AGCGCATTGC CGAGCGACTC
AACGACGTCA TCAAACGGCA GAGTTTTGCC GCCAGGATTG AGCACGATCT CGCCGCCGCC
AGTCTACCGC TGACAGTGCC GGAATATATG CTGATGCGCA TTGCTGTTCC GCTGATCATC
ACGGCGCTGG CGCTGCTGAT CTGGCGTCAG GTGATCGTCG TCCCGGCGGC GCTGATTGCC
GGACATCTGG GATGTTCGTT CTGGATGCGG ATGCGGCGCC AGCGTCGCAA ACAGGAGTTC
AACGACCAGC TGCCCGAAAC GCTCGACCTG ATCACGGCGT CGATGCGCGG CGGCTTCAGT
CTGGTCCAAT CGCTCGCCAG CGTCGCCAGC GATGTGCAGG AACCGACCCG CACAGAACTG
CGGCGGGTGT TTCAAGAAGT GCAACTGGGT CTCAGCGTCA CCCAGGCGCT CGATAATCTG
GTGCAGCGGA TGGAGAGCGC CGACCTCGAT CTGGTGGTGA CGGCGATCAA GATTCATGCC
CGCGTTGGCG GCAATCTGGG GCAGATTCTT GAGAATATCA GCACGACCAT GCGCGAGCGC
GCCAAACTGC GACGTGAAGT GCGCGTGATT ACGTCGATGC AACGCATTTC GAGTTACGTC
ATCGGTGCGT TGCCTTTCGC GCTGGCGCTG ATCATCTTCA CCATCAACCC GACGTACATG
ATGCGCCTGT TTCAACCGGG ATTGATCCTC TGCATTCCGA TCGGCGCGTT CATCTCGTCG
GTCGTCGGTT TCCTCATCAT TCGGAAGATT GTTGATGTGA GGATCTGA
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| Protein sequence | MLFQAFARGN GTMDVPVSLE FALPIGAALL ASLASLTLLF AARSLATRDT GVDSRISAYL
GGDDVARGAT LNDQRIAERL NDVIKRQSFA ARIEHDLAAA SLPLTVPEYM LMRIAVPLII
TALALLIWRQ VIVVPAALIA GHLGCSFWMR MRRQRRKQEF NDQLPETLDL ITASMRGGFS
LVQSLASVAS DVQEPTRTEL RRVFQEVQLG LSVTQALDNL VQRMESADLD LVVTAIKIHA
RVGGNLGQIL ENISTTMRER AKLRREVRVI TSMQRISSYV IGALPFALAL IIFTINPTYM
MRLFQPGLIL CIPIGAFISS VVGFLIIRKI VDVRI
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