| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3334 |
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| Symbol | miaA |
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| ID | 5210311 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 4182655 |
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| End bp | 4183572 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640596932 |
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| Product | tRNA delta(2)-isopentenylpyrophosphate transferase |
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| Protein accession | YP_001277645 |
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| Protein GI | 148657440 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase |
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| TIGRFAM ID | [TIGR00174] tRNA isopentenyltransferase (miaA) |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.221167 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCCAC TCATCGCCAT CGTCGGTCCT ACTGCGGTTG GCAAAACGGC GCTCAGCATC
CGCCTGGCGC AGCAGTTCAA CGGCGAGATT GTGTCGGTGG ACTCGCGCCA GGTGTATCGG
GGGATGGACA TCGGCACCGC CAAGCCCACC CCCGCCGAGC GCGCCGCCGT GCCTCATCAT
CTGATCGACA TCGTCGATCC GGATGAAGCA TTCTCGCTGG CGGTCTACCA GGACCTTGCC
ACTGCCGCCA TCGCCGACAT CGCAGCGCGG GGACGGTTGC CATTCCTCGT CGGCGGAACC
GGTCAGTACC TGGCAGCGGT TCTTCAGGGC TGGCAATTGC CGCGTGTGGC GCCCCGACCC
GATATTCGCG CCGCGCTCGA GCGTCAGGCG GCAGAACTCG GCGCAGCAGC GTTGTACGCA
CGTCTGGCGG AGATCGATCC GGCTGCCGCC GCCAGCATTC CTCCCAACAA CATTCGCCGC
ATTATCCGCG CGCTCGAAGT ATACGAAGCC ACCGGTAAAC CAATTTCGGA GCAGCGTTCC
GTTCAACCGC CGCCCTACCA CACCGTAACG ATCTGGCTCA CCCTGCCCAC GCCTGCCTTG
TACGCCCGGA TCGACGCGCG CGTGGAGGCA ATGATCGCCG CCGGTTTGCT CGACGAGGTG
CACCGACTGC TGGAACGTGG CTATCACTGG GACCTGCCCT CAATGTCGGG ACTGGGGTAC
CGCGAATTTC GTCCATACTT CGAGGGGCGC ATCACACTCG ACGAAGCCAT TGCCCGCCTC
AAGTACGACA CCCACGCTTT CGCCCGGCGT CAACCCGCCT GGTTCCGTCG ATTGCCCAAC
GTGTTGACCC TCCCTGCCGA TGCTTCCGAT CTCCAGCAAC AGGCAGCCAC GATTGTCCGT
CAATGGATCG ATGCTTAA
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| Protein sequence | MIPLIAIVGP TAVGKTALSI RLAQQFNGEI VSVDSRQVYR GMDIGTAKPT PAERAAVPHH
LIDIVDPDEA FSLAVYQDLA TAAIADIAAR GRLPFLVGGT GQYLAAVLQG WQLPRVAPRP
DIRAALERQA AELGAAALYA RLAEIDPAAA ASIPPNNIRR IIRALEVYEA TGKPISEQRS
VQPPPYHTVT IWLTLPTPAL YARIDARVEA MIAAGLLDEV HRLLERGYHW DLPSMSGLGY
REFRPYFEGR ITLDEAIARL KYDTHAFARR QPAWFRRLPN VLTLPADASD LQQQAATIVR
QWIDA
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