Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3325 |
Symbol | |
ID | 5210302 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 4174912 |
End bp | 4175496 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640596923 |
Product | NusG antitermination factor |
Protein accession | YP_001277636 |
Protein GI | 148657431 |
COG category | [K] Transcription |
COG ID | [COG0250] Transcription antiterminator |
TIGRFAM ID | [TIGR00922] transcription termination/antitermination factor NusG |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0701558 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.115804 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACAGAAG AGAAGAAAAA CCAGGAAACG TCGACCGAGT CGGAGATACG TGATGATGAC CGCCGATGGT ACGTCATTCA CACCTACTCC GGCTACGAGA ACAAAGTAAA ACAGAATTTG CTCCATCGCA TCGAAACGAT GGAGATGCGC GATCAGATTT TCAATGTGAT CGTGCCAACT GAAGAAGAGA TTGAAATCAA AAATGGTCAG CGCCGCACCG TCCAGAAAAA AGTCTTCCCC GGATATGTGC TGGTGCAGAT GAAAATGAAC GACAACTCAT GGTATGTCGT TCGCAACACC CCTGGCGTGA CCAGTTTCGT CGGGCATGGG AATAAGCCGA CGCCGCTCGA GGAGAGCGAA GTCAAGGCTA TCCTGCGCCA GATGGAGCAG GAAGCGCCCA AAGTGAAGGT GAGTTATCAG GTCGGTCAGG CGGTCAAGAT TACGGACGGT CCGTTCACCG ACTTCGAGGG AGTCGTGGAT GCCATCGACC ACGAGCGTGG CCGGGTGCGT GTGCTGGTCT CGTTCTTCGG TCGCGAGGCG CCGGTGGAAC TGGACTTCCT CCAGGTGACG CGCCTGGTCG AGTAG
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Protein sequence | MTEEKKNQET STESEIRDDD RRWYVIHTYS GYENKVKQNL LHRIETMEMR DQIFNVIVPT EEEIEIKNGQ RRTVQKKVFP GYVLVQMKMN DNSWYVVRNT PGVTSFVGHG NKPTPLEESE VKAILRQMEQ EAPKVKVSYQ VGQAVKITDG PFTDFEGVVD AIDHERGRVR VLVSFFGREA PVELDFLQVT RLVE
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