| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3294 |
|---|
| Symbol | |
|---|
| ID | 5210269 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | + |
|---|
| Start bp | 4142473 |
|---|
| End bp | 4142802 |
|---|
| Gene Length | 330 bp |
|---|
| Protein Length | 109 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640596890 |
|---|
| Product | thioredoxin |
|---|
| Protein accession | YP_001277605 |
|---|
| Protein GI | 148657400 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG3118] Thioredoxin domain-containing protein |
|---|
| TIGRFAM ID | [TIGR01068] thioredoxin |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00620964 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAGC CTGTCACTGT CACCGACGAT GATTTCGAGC AGCAGGTGCT GAAGTCCGAC
ATTCCGGTTG TTGTCGACTT CTGGGCGCCG TGGTGCGGTC CATGCCGGGT CATTGCGCCG
ATCCTCGAAG AACTGGCAAA CGAGTACGAT GGCAAAGTCA AGGTTGCCAA AGTCAACACC
GACGACCATC AGCTCTGGAT GAGCAAGTTT GGCATCATGG CAATCCCGAC CATGATCTTT
TTCAAGAACG GCAAGGAGAT CAATCGGATT GTCGGCGCCG GTCCCAAGCG CATGCTGAAA
GAGGCATTTG ATGCAGCCGT TGCTGCATAA
|
|---|
| Protein sequence | MAKPVTVTDD DFEQQVLKSD IPVVVDFWAP WCGPCRVIAP ILEELANEYD GKVKVAKVNT
DDHQLWMSKF GIMAIPTMIF FKNGKEINRI VGAGPKRMLK EAFDAAVAA
|
|---|
| |