| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3251 |
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| Symbol | |
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| ID | 5210226 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 4096460 |
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| End bp | 4097194 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640596847 |
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| Product | alanine racemase domain-containing protein |
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| Protein accession | YP_001277562 |
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| Protein GI | 148657357 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
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| TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.183035 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000198069 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAGACGT TCATTGACCG ACTGAGGATC GTGCGCGAGC GAATCGCCGC CGCAGCGCAG
CGCGCACACC GCGATCCTGC GACGATTCGC CTGGTGGGGG TGACGAAGGC GCAGCCGGTG
GAGGCGATCC GCACGGCGCT GGATGCGGGT CTGTGCGAGA TTGGCGAAAA CCGGGTGCAG
GAGGCGGAAG CCAAAATGAC TGCGCTGGAG GCGGAACGCT ATCGTTTGAC CTGGCACCTG
ATCGGGCATC TGCAAACGAA CAAGGCAAAA AAAGCCGCCA CGTTGTTCGA TATGGTCCAT
TCGGTCGATA GTCTGCGGTT GGCGCAGGCT ATCAACCGCT ACGCTGCTGA GGTGCGTCGT
GATCCGGGGA GACGTTTGCC CATCCTCTTG CAGGTGAATG TCTCTGGTGA GGCGACGAAG
TCCGGTTTCG ATCTGTATGG TTGGGAAACG CAGCCCGATG TGTATGAGCG TTTTTGCGCC
GATGTCGAGC AGATACTGGC GCTGCCGCAC CTGGACGTGC GCGGGTTGAT GACGATTGCG
CCATGGGCGC CCGACCCGGA AGCAGCGCGC CCCGTGTTCC GCGCGACGCG GCGCCTGCGT
GACGCGCTGG CGCAGCGATT TCCAATCGCA CCATGGCGTG ATCTGTCGAT GGGTATGACT
GACGACTTTG AAGTCGCCAT TGAAGAAGGG GCGACTATCG TGCGGATCGG GCGGGCGATC
TTCGGCGAGC GGTAA
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| Protein sequence | METFIDRLRI VRERIAAAAQ RAHRDPATIR LVGVTKAQPV EAIRTALDAG LCEIGENRVQ
EAEAKMTALE AERYRLTWHL IGHLQTNKAK KAATLFDMVH SVDSLRLAQA INRYAAEVRR
DPGRRLPILL QVNVSGEATK SGFDLYGWET QPDVYERFCA DVEQILALPH LDVRGLMTIA
PWAPDPEAAR PVFRATRRLR DALAQRFPIA PWRDLSMGMT DDFEVAIEEG ATIVRIGRAI
FGER
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