Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3233 |
Symbol | |
ID | 5210208 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 4071891 |
End bp | 4073507 |
Gene Length | 1617 bp |
Protein Length | 538 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640596829 |
Product | single-stranded nucleic acid binding R3H domain-containing protein |
Protein accession | YP_001277544 |
Protein GI | 148657339 |
COG category | [S] Function unknown |
COG ID | [COG3854] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.384079 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGTGC AACAGGATAT TACCAGCAAT ATCGAATTAC TTCTGGCAAC GCTTCCGGCG CCTATTCGTC AGGCGATTGA AACGGGTCCC GATGACCGGG AGGACCTGCT GGAAGTGATC ATGGATCTTG GTCGACTCCC CGAAGCGCGC TATCGGAATC ACGAACGTTT TCTCAGTGAT CGCGAAGTCA CGCAGGAAGA TATCGACTAT GTCATTGGTC GAATCGGCGC CTTCGGCGAA GATAACCGTG CGGGCATCCC GCGCACGCTG CACCGGATCT CGGCGATCCG CAATCGTACC GGTCGCGTGA TCGGGTTGAC CTGTCGTGTC GGGCGCGCCG TCTTCGGTAC GATCACGATC CTGCGCGATC TGATCGAGTC GGGGAAGAGC GTGCTGCTGC TGGGACGTCC CGGCGTCGGC AAGACGACGA TGCTGCGCGA AACGGCGCGG GTGCTGGCGG AAGATCTGCG GAAGCGCGTT GTGATTGTAG ATACGTCGAA CGAAATTGCC GGTGACGGCG ATATTCCCCA CCCCGGCATC GGGCGGGCGC GCCGCATGCA GGTGCCGCGA CCGTCGGAAC AGCACGCGGT GATGATCGAA GCCGTCGAAA ATCATATGCC GGAAGTGATC GTGATCGATG AGATCGGGAC GGAACTCGAG GCGCTGGCTG CGCGTACCAT CGCCGAACGC GGCGTTCAGT TGATCGGCAC GGCGCACGGG CAGACGCTCG AGAACCTGTT GTCGAACCCG ACATTGTCCG ATCTGATCGG CGGCATTCAG GCGGTGACGC TTGGCGATGA AGAGGCGCGC CGGCGGGGAA CACAGAAGAC GGTGCTTGAA CGAAAGGCGC CGCCAACTTT CGACATTCTG GTCGAAATTC AGAACTGGGA TCAGGTGACA GTCTATCCCG ACGTTGCCAG CGCGGTGGAT AGTCTGCTGC GCTCCGAGCC GCCGCAGGCG GAGGTGCGCC GACGCACTGC TGACGGTGAG ATCGAAGTCT TTCCGGCTTT TACCGGTGAG CATGCTGTTC CGTCGATCCC GGGCATTCGT CGTGGCGGCG GGCGTGAACG TGGGGAGCGA AGCCCGCGTG TATCGTCGGC GCCTGCCGCT TCCAGCGTCG GAATGACACC GCAACGTATC TACCCGTTCG GTGTCAGCCG TGATCGTCTG GAGCGGGCGA TTGCCAGCCT GCACGTTCCG GCGACCATCG TGCGCGACAT GGGTGAGGCG ACGATGGTGA TGACCCTGAA GAATTATTAT CGTCAGGGAT CGCAGCGTGT GCGTCAGGCG GAAGAGCGTG GCGTGCCGGT TTATGTGTTG CGGAACAATA CCCTGGCGCA GATGGAGCGT CAACTCGCCG ATGTGTTCAA TATCAGTCTG AGCGACAATG GATTGCAACG CCGGGCGGAT CGTGATGATG ATGCTACCAT GACCGAGGCG CTGCTGGAGG TCGAAACAGC GATTACGCAG GTTCTGAACG GCGAACGTTC GTCGGTTGAA CTGCAACCGC AGAGCAGTTA TGTGCGCCGG TTGCAGCATC AGATGGCGGA GCGCTACAAC TTGCAATCGG AGAGTCGCGG ACGCGAACCG AACCGACGGG TCAAAATCTT TCGTTAG
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Protein sequence | MAVQQDITSN IELLLATLPA PIRQAIETGP DDREDLLEVI MDLGRLPEAR YRNHERFLSD REVTQEDIDY VIGRIGAFGE DNRAGIPRTL HRISAIRNRT GRVIGLTCRV GRAVFGTITI LRDLIESGKS VLLLGRPGVG KTTMLRETAR VLAEDLRKRV VIVDTSNEIA GDGDIPHPGI GRARRMQVPR PSEQHAVMIE AVENHMPEVI VIDEIGTELE ALAARTIAER GVQLIGTAHG QTLENLLSNP TLSDLIGGIQ AVTLGDEEAR RRGTQKTVLE RKAPPTFDIL VEIQNWDQVT VYPDVASAVD SLLRSEPPQA EVRRRTADGE IEVFPAFTGE HAVPSIPGIR RGGGRERGER SPRVSSAPAA SSVGMTPQRI YPFGVSRDRL ERAIASLHVP ATIVRDMGEA TMVMTLKNYY RQGSQRVRQA EERGVPVYVL RNNTLAQMER QLADVFNISL SDNGLQRRAD RDDDATMTEA LLEVETAITQ VLNGERSSVE LQPQSSYVRR LQHQMAERYN LQSESRGREP NRRVKIFR
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