Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3232 |
Symbol | |
ID | 5210207 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 4071184 |
End bp | 4071864 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640596828 |
Product | dTMP kinase |
Protein accession | YP_001277543 |
Protein GI | 148657338 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0125] Thymidylate kinase |
TIGRFAM ID | [TIGR00041] thymidylate kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCTGT TTGTGACATT CGAGGGTCCT GAGGGAAGCG GGAAAAGCAC GCAGGCGCGT CTGTTGTACG AATCGTTGCA CGCGCGGCGC TTCCCGGTCA TTCTCACACG GGAACCGGGC GGCACGCGGA TCGGCGACCT GATCCGGCGG ATTGTGCTCG ATCTTCAGCA TACCGAAATG GCGCCGACGG CCGAGATGTT GCTCTTCTCG GCGGCGCGGG CGCAACTGGT CAGTGAGGTT ATTCGTCCGT ATCTGGAGCA GGGCGGCATT GTGCTGTGCG ACCGGTACGC CGATTCGACC TTTGCCTATC AGGGGTACGG TCTGGGGCGC GATCTGGCGG AATTGCGCGT GATTACAGCG GCTGCTACGG GCGGCTTGCG CCCCGATATA ACGTTCTATC TCGACATCAG CGCCGCAGAG GGACTGGAAC GCAAGCGTCG CAAAGGTGCG CGTTCAACCG GTCAGCGTGG CGCCAATAAT GATGAGTGGA ATCGTCTCGA TGCGCGGGAA CTGGAGTATC ATCAACGGGT CGAAGCCGGC TATCGCGAGC TGATCGCCGC AGATCCAGAA CGCTGGCGCG TGCTCGATGC ACGGCAGTCG ATCGAGGCGC TGGCGGAACA GATCGGCGCA ATTGTCGAGC CGTATCTGGC ATCGATCACG CGGTTAGAAA CCGTGCTGTA G
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Protein sequence | MSLFVTFEGP EGSGKSTQAR LLYESLHARR FPVILTREPG GTRIGDLIRR IVLDLQHTEM APTAEMLLFS AARAQLVSEV IRPYLEQGGI VLCDRYADST FAYQGYGLGR DLAELRVITA AATGGLRPDI TFYLDISAAE GLERKRRKGA RSTGQRGANN DEWNRLDARE LEYHQRVEAG YRELIAADPE RWRVLDARQS IEALAEQIGA IVEPYLASIT RLETVL
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