| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3165 |
|---|
| Symbol | |
|---|
| ID | 5210135 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | - |
|---|
| Start bp | 3986176 |
|---|
| End bp | 3987600 |
|---|
| Gene Length | 1425 bp |
|---|
| Protein Length | 474 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640596756 |
|---|
| Product | PUCC protein |
|---|
| Protein accession | YP_001277476 |
|---|
| Protein GI | 148657271 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0360392 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGACTG GAAGCCAGGG TGTGTCCGGT CTGGCGCAGC GCGTCAGTGG CTGGTTCAGC
GATCACCAGG CGATTGCCTG GTGGACGAAT GTGCTGCGTC TGGGCTTGTT TCAACTGGGC
ATGGGAGTTG CACTGGCGCC GATCACCGGC ACGCTCAACC GTGTGTTGAT CGGTGATATG
CACATTTCGG CTGCTCTTGT CGCTTCGTTA ATGGCGATCC ACTACTTTGT CTCGCCGGTA
CGCGCAGTCT TTGGGTATCG GTCGGATGTG GAACGGGCGC GAGGGCGCTG GCGCATGCCC
TATGTGGCAT TGGGTCTCAT GCTGACATAT GGCGGGTTGG CGACTGCACC GTTCTCGTTG
ATCCTGCTGG GTCCCAACGA CTCGATGCCG TTCGCAATCG CGCTCATCAT CTGTACTGCG
ATTTTCCTGG CATACGGTGT CGGCGTCAAT ATCGTCGAAA CAACCTATCT GGCGCTGGTC
AGCGATATTA CTCCGCCGCG CGACCGCGGG AAGGTGCTGG CGGTGCTGTG GATGATGCTG
GTCGTCGGCA CCATCGTCAG TTCGATCATC GTTGGCGCGA TCCTCGAACG ATATTCGCCG
GTGCTGTTGA TCCAGGTGAT GCAGGGTTCG GCGGTCATCT TCGCTGTGCT GGCGACGATA
TCGCTGCTGG GGCGTGAGCA ACTGCGCCCT GATGGAACCC TCGTCAACCA TACCGATGAT
ATTCGTGTGC GGTTGACGCT GGTCGAGCAA CTCCGTGTGG TCTGGCAGCA ACCGGGGTTG
CGCGCGTTGT TCGTTGTGCT GTTTGGCGGC ACGCTGGCGC TCGCCACACA CGATGTGTTG
CTCGAACCGT ATGGTGGTCA GGTGCTCGGC ATGAGCGTCG CCGCCACAAC GCGGTTGACG
GCGTTGTGGG GCGTGGCGAT GATCATCGGG ATTACCGCCG CAGGTCTGGC GTTGTGGCGT
GGATACTCTC CTATCGGAGT AATTATTGGC GGGTGCATTT CCGGCGCGCT TGGGTTCCTG
GTGGTCATCC TGGCAGGCGG AAGCGTCGAT GTGAATATGT TCCGTGGCGG CGTGGTGTTT
ATTGGTATCG GTCGCGGATT ATTTATCGTT GGTTCGGTGG CGTTGATTAT GGCGCTTGCC
GACCGCGCGC ATGCTGGATT GTTCATTGGT CTGTGGGGTG TGACGCAGGC GCTGGCGCAG
GGTTTCGGCA CGGTGGGTGG CGGTCTGGCG CGCGATATTG CGCAACAGCA AACCGGCAGC
ATCCTGCTCG GATATACTTC GGTCTATGCC GCAGCACTGG TTATTCTGCT CCTTACCCTG
GGGTTGATCA TGGTGTTGCG CCTCGGACGT CAGCTGCGCG AGGGCGCCGT CCGCTCACCC
TGGTCAGGGT TGCAGGATCT GCCCGGCGAT CAGATTCTGT TCTGA
|
|---|
| Protein sequence | MATGSQGVSG LAQRVSGWFS DHQAIAWWTN VLRLGLFQLG MGVALAPITG TLNRVLIGDM
HISAALVASL MAIHYFVSPV RAVFGYRSDV ERARGRWRMP YVALGLMLTY GGLATAPFSL
ILLGPNDSMP FAIALIICTA IFLAYGVGVN IVETTYLALV SDITPPRDRG KVLAVLWMML
VVGTIVSSII VGAILERYSP VLLIQVMQGS AVIFAVLATI SLLGREQLRP DGTLVNHTDD
IRVRLTLVEQ LRVVWQQPGL RALFVVLFGG TLALATHDVL LEPYGGQVLG MSVAATTRLT
ALWGVAMIIG ITAAGLALWR GYSPIGVIIG GCISGALGFL VVILAGGSVD VNMFRGGVVF
IGIGRGLFIV GSVALIMALA DRAHAGLFIG LWGVTQALAQ GFGTVGGGLA RDIAQQQTGS
ILLGYTSVYA AALVILLLTL GLIMVLRLGR QLREGAVRSP WSGLQDLPGD QILF
|
|---|
| |