Gene RoseRS_3097 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3097 
Symbol 
ID5210065 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp3888174 
End bp3889022 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content61% 
IMG OID640596688 
Producthypothetical protein 
Protein accessionYP_001277410 
Protein GI148657205 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0616] Periplasmic serine proteases (ClpP class) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.645048 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATCTGA TTGGGCTATT CTGGATCTTT CTCATTATCT CATCACTGCA ACCGGTCATC 
CGTCAGAAAA TGCTGGAGAC CGGACGCCTG CGGTTGCTCG AACGCATCGA ACAACAACGG
CAGAGTCGCG TCATCGTACT GATCCACCGG CAGGAAACGC TCAGCCTGCT CGGATTTCCG
CTGGTACGCT ACATCGACAT CGACGACTCG GAAGCCGTGT TGCGGGCGAT CAAAATGACC
GACAGGGACG TTCCAATCGA CCTGGTGCTC CACACACCGG GCGGATTGGT GCTGGCCGCC
GAACAGATCG CCAGTGCGCT GCGCAAGCAT CCGGCGAAGG TCACCGTGTT TGTGCCGCAC
TACGCCATGT CGGGCGGTAC GCTGATCGCC CTGGCTGCCG ATGAGATTGT GATGGACGAA
AATGCCGTCC TGGGACCGGT CGACCCGCAA CTGGGACAGC AACCGGCGGC CTCGATTCTT
AAGGTGCTCG AACGCAAACC GATCAGCGAA ATCGACGACG AGACCCTGAT CATGGCCGAC
ATCGCCGAGA AAGCCATTCG CCAGGTGAAA GCGACAGTCA TTGAACTGCT GGCAGACCGC
ATGGGCGCCG AACCGGCGGA ACATATTGCA ACGATGCTGG CAACCGGCGT CTGGACGCAC
GATTATCCGA TCAGCGTCCG CGAAGCGCGC GAACTCGGCT TGCCGGTCAG CACCGATATG
CCGCCGCTCA TCTATCAGTT GATGGGGTTG TACCCGCAAA CCGCCCAGCG CCGCCCATCG
GTCGAGTACA TCCCGCTCCC CCGGTCGCGC GAGCCGGAGC GACGCCAGGT GCGCGGCTCA
CCGTGGTGA
 
Protein sequence
MDLIGLFWIF LIISSLQPVI RQKMLETGRL RLLERIEQQR QSRVIVLIHR QETLSLLGFP 
LVRYIDIDDS EAVLRAIKMT DRDVPIDLVL HTPGGLVLAA EQIASALRKH PAKVTVFVPH
YAMSGGTLIA LAADEIVMDE NAVLGPVDPQ LGQQPAASIL KVLERKPISE IDDETLIMAD
IAEKAIRQVK ATVIELLADR MGAEPAEHIA TMLATGVWTH DYPISVREAR ELGLPVSTDM
PPLIYQLMGL YPQTAQRRPS VEYIPLPRSR EPERRQVRGS PW