Gene RoseRS_3092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3092 
Symbol 
ID5210060 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp3884609 
End bp3885004 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content61% 
IMG OID640596683 
Productthioesterase superfamily protein 
Protein accessionYP_001277405 
Protein GI148657200 
COG category[I] Lipid transport and metabolism 
COG ID[COG1607] Acyl-CoA hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.440114 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCG CTGACCGTGC CGAAACGCGC ATGGTTTTCC CGGTTTTTCC GGTCGATACC 
AACCACTACC GCACCCTGTT CGGCGGCAAG GCGGTTGCCT GGATCGATCA GGCAGCGTTC
ATCTGCGCGA CGCGCTGGTG TCGGCGCAAG GTTGTGACGG TGCGGATCAG TGAAGTGAAC
TTTCACCATC CGATCCGTGA GGGGTCGATT GTCGAAGTGA TCGCTCGTCT GGTGCGCACC
GGACGGAGTT CGATGCAGAT CGCGGTGGAT GTCTGGTGGG AACCGATGGA TTATGAAGAA
CGGGTGCTGG CGTGCCAGGC GACGTGTGTG CTGGTCGCGC TCGATGACAA CAATCGCCCG
GTCGCTGTGC CGCCGCTCAC GGAGACAATG TCGTGA
 
Protein sequence
MSAADRAETR MVFPVFPVDT NHYRTLFGGK AVAWIDQAAF ICATRWCRRK VVTVRISEVN 
FHHPIREGSI VEVIARLVRT GRSSMQIAVD VWWEPMDYEE RVLACQATCV LVALDDNNRP
VAVPPLTETM S