Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3092 |
Symbol | |
ID | 5210060 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 3884609 |
End bp | 3885004 |
Gene Length | 396 bp |
Protein Length | 131 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640596683 |
Product | thioesterase superfamily protein |
Protein accession | YP_001277405 |
Protein GI | 148657200 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1607] Acyl-CoA hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.440114 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCCG CTGACCGTGC CGAAACGCGC ATGGTTTTCC CGGTTTTTCC GGTCGATACC AACCACTACC GCACCCTGTT CGGCGGCAAG GCGGTTGCCT GGATCGATCA GGCAGCGTTC ATCTGCGCGA CGCGCTGGTG TCGGCGCAAG GTTGTGACGG TGCGGATCAG TGAAGTGAAC TTTCACCATC CGATCCGTGA GGGGTCGATT GTCGAAGTGA TCGCTCGTCT GGTGCGCACC GGACGGAGTT CGATGCAGAT CGCGGTGGAT GTCTGGTGGG AACCGATGGA TTATGAAGAA CGGGTGCTGG CGTGCCAGGC GACGTGTGTG CTGGTCGCGC TCGATGACAA CAATCGCCCG GTCGCTGTGC CGCCGCTCAC GGAGACAATG TCGTGA
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Protein sequence | MSAADRAETR MVFPVFPVDT NHYRTLFGGK AVAWIDQAAF ICATRWCRRK VVTVRISEVN FHHPIREGSI VEVIARLVRT GRSSMQIAVD VWWEPMDYEE RVLACQATCV LVALDDNNRP VAVPPLTETM S
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