Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3080 |
Symbol | |
ID | 5210048 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 3870694 |
End bp | 3871734 |
Gene Length | 1041 bp |
Protein Length | 346 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640596671 |
Product | threonine synthase |
Protein accession | YP_001277393 |
Protein GI | 148657188 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0498] Threonine synthase |
TIGRFAM ID | [TIGR00260] threonine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0615422 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00256944 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTGTTCG AACGCTATGG CGCATTTCTG CCATTGACCG GGCAAACGCC GCGCCTCAGC CTTGGCGAAG GCGATACGCC GCTGATTGCC GCACCCCGCC TGGCGCGCTC CATCGGCGTG CGTGAGTTGT ACCTGAAGTA CGAAGGCGCC AACCCGACCG GATCGTTCAA AGATCGCGGA ATGGTGGTGG CGGTCGCCAA AGCCATCGAA GCCGGCGCTA CCTCGGTCAT CTGCGCTTCG ACCGGCAATA CCTCGGCGAG CGCGGCGGCA TATGCGGCGC ATGCCGGCAT CGAGTCAATT GTGGTTGTGC CTGCCGGAAA GATCGCCCTG GGCAAACTGG CGCAGGCGCT GATGTATGGC GCGCGGTTGC TGGTGATCGA GGGCAACTTC GACGAAGCGC TGCGGATTGT GCGCGATCTG GCGCGGCAGT TTCCGGTGAC GCTGGTCAAC TCCGTCAATC CGCACCGCCT CGAAGGGCAG GCGACGGCAG CCTACGAGAT CTGTGATACG CTGGGTGGTC CGCCCGATGC GCTCTGTCTG CCGGTCGGCA ATGCGGGGAA TATCACCGCG TACTGGATGG GATTCCGCCG GTATTACGAA GCAGGCAGGA TCAACCGCCT GCCGAAGATG CTCGGCTTTC AGGCGGAGGG CGCAGCGCCG ATTGTGCACG GCGCTCCGGT GGAACATCCT GAGACGGTTG CGACCGCGAT CCGGATCGGC AACCCGGCGA GCTGGTGTTA TGCGCTCGAT GCGCGCGATC AGTCGGGAGG ATCGATCGAC GCCGTCAGCG ATGAGCAGAT CCTGCGGAGC TGGCGCGACC TGGCGCGCCT GGAAGGGGTA TTCGCGGAGC CGGCATCGGC AGCCGGCGTC GCCGGGTTGC GCAAAATGGT CGCCGAAGGG CGCGCCGATC CGGATGCATG CTATGTGGCG GTGCTGACCG GTCATGGACT GAAAGATCCC GGACTGGCGG TGGAGCAATT CGAGACGCCT CAGCCGGTGC CGGCGGATAT GAATGCCATT CTCCGATGGT TGGGCTGGTG A
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Protein sequence | MLFERYGAFL PLTGQTPRLS LGEGDTPLIA APRLARSIGV RELYLKYEGA NPTGSFKDRG MVVAVAKAIE AGATSVICAS TGNTSASAAA YAAHAGIESI VVVPAGKIAL GKLAQALMYG ARLLVIEGNF DEALRIVRDL ARQFPVTLVN SVNPHRLEGQ ATAAYEICDT LGGPPDALCL PVGNAGNITA YWMGFRRYYE AGRINRLPKM LGFQAEGAAP IVHGAPVEHP ETVATAIRIG NPASWCYALD ARDQSGGSID AVSDEQILRS WRDLARLEGV FAEPASAAGV AGLRKMVAEG RADPDACYVA VLTGHGLKDP GLAVEQFETP QPVPADMNAI LRWLGW
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