Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3060 |
Symbol | |
ID | 5210028 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 3844054 |
End bp | 3844497 |
Gene Length | 444 bp |
Protein Length | 147 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640596652 |
Product | response regulator receiver protein |
Protein accession | YP_001277374 |
Protein GI | 148657169 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.527476 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00457067 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACCGACA GCGCATTCAG AGTATTGCTG GTGGAAGATA ACGATGACCA TGCCGAATTA ATCCGGCGAA CCCTGGGCGA GCATCAGCGA GCGCCGCAGA TTGTGCATAT CAGCGATGGT GAGAGCGCTC TCGATTACCT CTATCGTCGC GGAACCTGGA ACGACCCCAA CCAAAGCCCC CGCCCCCACG TGATACTGCT CGATCTGCGT CTGCCGCGCG TCGATGGGCT TGAAGTGCTG ACCAGCATCA AGCAGTCGGC AGAATTGCGC CACATCCCTG TGATCATTCT GAGCTCATCA TCGGCAGAAG GCGACGTGTC GCGCGCCTAC GACGCCTATG CCAACAGTTA CCTTGTCAAG CCGTTTGGTT TTGAGGAGTT CCGAAGTCTC ATGCACGACG TTGGCGTATA CTGGTTGACC CATAACAAAC TCTCGGCGAT ATGA
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Protein sequence | MTDSAFRVLL VEDNDDHAEL IRRTLGEHQR APQIVHISDG ESALDYLYRR GTWNDPNQSP RPHVILLDLR LPRVDGLEVL TSIKQSAELR HIPVIILSSS SAEGDVSRAY DAYANSYLVK PFGFEEFRSL MHDVGVYWLT HNKLSAI
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