Gene RoseRS_3060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3060 
Symbol 
ID5210028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp3844054 
End bp3844497 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content56% 
IMG OID640596652 
Productresponse regulator receiver protein 
Protein accessionYP_001277374 
Protein GI148657169 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.527476 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00457067 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCGACA GCGCATTCAG AGTATTGCTG GTGGAAGATA ACGATGACCA TGCCGAATTA 
ATCCGGCGAA CCCTGGGCGA GCATCAGCGA GCGCCGCAGA TTGTGCATAT CAGCGATGGT
GAGAGCGCTC TCGATTACCT CTATCGTCGC GGAACCTGGA ACGACCCCAA CCAAAGCCCC
CGCCCCCACG TGATACTGCT CGATCTGCGT CTGCCGCGCG TCGATGGGCT TGAAGTGCTG
ACCAGCATCA AGCAGTCGGC AGAATTGCGC CACATCCCTG TGATCATTCT GAGCTCATCA
TCGGCAGAAG GCGACGTGTC GCGCGCCTAC GACGCCTATG CCAACAGTTA CCTTGTCAAG
CCGTTTGGTT TTGAGGAGTT CCGAAGTCTC ATGCACGACG TTGGCGTATA CTGGTTGACC
CATAACAAAC TCTCGGCGAT ATGA
 
Protein sequence
MTDSAFRVLL VEDNDDHAEL IRRTLGEHQR APQIVHISDG ESALDYLYRR GTWNDPNQSP 
RPHVILLDLR LPRVDGLEVL TSIKQSAELR HIPVIILSSS SAEGDVSRAY DAYANSYLVK
PFGFEEFRSL MHDVGVYWLT HNKLSAI