Gene RoseRS_3014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3014 
Symbol 
ID5209982 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp3794264 
End bp3794728 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content66% 
IMG OID640596606 
Producthypothetical protein 
Protein accessionYP_001277328 
Protein GI148657123 
COG category[L] Replication, recombination and repair 
COG ID[COG0328] Ribonuclease HI 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.157547 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCATC TGTTGCTTCA GGTCGACGGT ACGCCTGGTT GCCCGCCGCG CGGTATCGCG 
GGGCTGGGGA TCATCGTGCG CAACCAGGCG GGCGCGGTGC TGGCGTGGTC GTGCGAACGC
GCACCGGCGA CGACCAACAA CGAGGCGGAG TATCTGGCGG TCATTGCCGG GTTAACGCTG
GTCATCCGGC GTTTTCCCGG CGTGGCGGTG CGGTGCCTGA CCGATAGCCG CATTGTGGTC
GATCAACTCA CAGGACGGCA TGCTGTGCGA GCGATGGCGC TCAAACCGCT GCACGAACGC
GCCCGTATGC TCGTCCTTCA GCACGGCAGC GTGACGTTCA TCGCCATTCC GCGCGAACTC
AACCGTCTGG CGGACGCGCT GGCGTGGGAG GCGCTCGACG GACGCGGCTG GCTTGCGCGT
GTCGGTCGAG AAGCGGGTCT TGCTACGGTC AACAGTGATA TGTGA
 
Protein sequence
MSHLLLQVDG TPGCPPRGIA GLGIIVRNQA GAVLAWSCER APATTNNEAE YLAVIAGLTL 
VIRRFPGVAV RCLTDSRIVV DQLTGRHAVR AMALKPLHER ARMLVLQHGS VTFIAIPREL
NRLADALAWE ALDGRGWLAR VGREAGLATV NSDM