Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3012 |
Symbol | |
ID | 5209980 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 3791391 |
End bp | 3792389 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640596604 |
Product | CRISPR-associated Cas1 family protein |
Protein accession | YP_001277326 |
Protein GI | 148657121 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1518] Uncharacterized protein predicted to be involved in DNA repair |
TIGRFAM ID | [TIGR00287] CRISPR-associated endonuclease Cas1 |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0160933 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAACCC TTTACATCCA GGAACAGGGC GTGATGGTGC GCAAACGTGA TAATCAGGTG CTGATCACGA AAGACGGGCA GACGCTGAGC GAAGTGCCAC TGGCGAAGAT TGACCAGGTT GTGCTGATGG GGCGGGGGGT GCAACTTTCG ACGGCGCTGC TGATCGATCT GCTTGAACGC GGCATTCCGG TGACGTTCAC CAATCAGCAC GGCAGCCGCC ATTACGCCAC ACTGACTGCC GGACCATCAC GCTTCGGCGA TCTGCGCATA CGCCAGATGC AGTTTGTCGG TGCACCGGAT CGCGCCCTGC GCCTGGCAAA GGACATTGTG AGCGCCAAAC TGACCAATCA GCGTCGTTTG CTGGCAGCGA CCGGGTGGCC AGCCGCAGCG ACGGCGATCG CGCAGATCGA TGCAGCGCTG ACTGCGGCAG CAAACGCGCC GCATGTGGAC ATGCTGCGCG GGCATGAAGG CGCAGCGGCG GCGGCATACT TCGGCGCGTG GCGCGCATCG CTTCCGCCGG TGTGGGGATT CGGCGGGCGT GCCTTCTACC CGCCGCCCGA CCCGATCAAC GCCATGCTCT CATTCGGGTA TACGCTGGCG CTCCATGATG TCATTACCGC TGTGCAGATC ACCGGTCTCG ATACGTACCT GGGCGTGTTT CATGTGATCG AGCCTGGTCG TCCATCACTG GCGCTCGACC TGCTGGAGGA GTTTCGCCCG TTGATCGTCG ACCGGTTGGT AATCGATCTG GTGCGTACCA ATGCGATTGG TCGCGAACAT TTTCACCATC CGCAGGAACG ACCGGATGCC GTATACCTCG ATGATGTCGG GCGTACACTG CTGGTGCAGC GGTATGAATC GATGCTTCAG ACAAAGGTAC GGTTGCCTGG CGGCGAGCAG ACGCCGTTGC GACGGGTGAT CCTGCTGCAG GCGCAGGCGA TTGCGCGTAT CGTTCGCGGT GAGCAGGAAC AGTACACAGG ATTCAGTCTG AATAACTGA
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Protein sequence | MPTLYIQEQG VMVRKRDNQV LITKDGQTLS EVPLAKIDQV VLMGRGVQLS TALLIDLLER GIPVTFTNQH GSRHYATLTA GPSRFGDLRI RQMQFVGAPD RALRLAKDIV SAKLTNQRRL LAATGWPAAA TAIAQIDAAL TAAANAPHVD MLRGHEGAAA AAYFGAWRAS LPPVWGFGGR AFYPPPDPIN AMLSFGYTLA LHDVITAVQI TGLDTYLGVF HVIEPGRPSL ALDLLEEFRP LIVDRLVIDL VRTNAIGREH FHHPQERPDA VYLDDVGRTL LVQRYESMLQ TKVRLPGGEQ TPLRRVILLQ AQAIARIVRG EQEQYTGFSL NN
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