| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2981 |
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| Symbol | |
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| ID | 5209949 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 3732589 |
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| End bp | 3735123 |
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| Gene Length | 2535 bp |
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| Protein Length | 844 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640596573 |
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| Product | alanine racemase |
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| Protein accession | YP_001277295 |
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| Protein GI | 148657090 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase
[COG0787] Alanine racemase |
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| TIGRFAM ID | [TIGR00492] alanine racemase
[TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCGATC TGGACGATCT TCTTGCGGCA GGCGGGCGAC TGGCGTCACC GGTGTATGCG
CGTCAGTTCA GCGGCTTCTC GTATGACTCG CGGTTGACCG CTGCGGGGGA ACTGTTCCTG
GCGCTGCGCA CGCCGCGCGG CGATGGTCAT GCCTATATTG CCGATGCGCT GGCGGCTGGC
GCCACTGGCG TGATCTGTGA GAAGCCGCCC GCCGATCTGT CCAATACCAC CATGATCGTC
ACAGATGATC CGGCGCTCCT TGCAGCGCGC TGGGCAGCAG CGCGGTTGCG ACAGGTTGCG
CCACGGGTCA TCGGCGTGAC CGGCAGTGTC GGCAAGACGT CGGCGACCCG CGCGATTGCT
GCTGTGCTTT CCGGTCTTGC GCCGACCTTT CGCAGTCGTC GCAGTTTCAA TTCGCTGATC
GGGCTGCCGG TCTCGCTTGC GCGGCTCCAG GACGATCACC GCTTTGCGGT GCTGGAATAC
GGCACGGCGT ATCCTGGCGA GTTGCACCGT CTGACGGCGC TCTTTCCGCC GCACGTCGCG
GTTGTCACGT CTGCCGCTCC GATGCGACTA TCGGCATTTG GATCGGTTGC GGATCTGGTG
CGTGAGTATG GCGCACTGGT CGCTGCGCTT CCCGTCGATG GATGGGCAGT GGTGAACGGT
GACGATCCTG CGCTCGCCGG GCTGTGCGAC ACGACCCGCG CCAGGGTGCT GACGTTTGGA
ACCGGCGCAT CCTGCGATTT GCGCGGAGAG GCGCCGCAGT ATGCACTCAA CGGGACGCGC
ATGCGGGTGT GTTATCGCGG CGAGTCAGTC GATACGGTCA TTCCGCTGAT CGGTGAACCG
GCGGTTGGCG CGGCGCTGGC TGCTGTCGGA GTGGCGCTTG TCTGCGGGAT GACGCTGGAG
CGCGCCGCCG AACGGCTGGC GCTGGTCGAG CCGCCAGCCG GACGTCTCCG TCCACATCTG
GCGCGCAGCA GCGCGATCGT GATCGATGAT ACAGTTGGCG CTGAACCATC GGCGATGTTG
GCGGCGTTGC GAACGCTGGC GATCCTTCCG GCGCAACGGC GAATCGCAGT GCTCGGCGAT
CTTCCTGCCG ACAGTTCCAT CCCCGGTGAG CAGAACGATA CGTATGCGGC GATCGGAAGG
CTTGCGGCGC GCACTGCCGA TCTGTTGATC TGGAAGGGGG ATGCCGGAAC GCACGTCATG
CGCGCCGTGC AGCGGGTGCG TACTGGTATG TCGGCGACGC TCGTGCATAC GATTGCCGGT
GCGCTCGAAG CCTTGCCGCC TGATCTGGGG GCAGGTGATC TGGTGCTGGT CTGTGGCGGT
GCAACGGCGC GCCTGGAGCG CCTGGTCGCT GCGCTGATCG ATCCGTCGGT GAATGCCTCG
CAGGCGCTGG TGCGTCAGGA TGCCGGATGG CGCGCCACGC GCATCGCCGA TCCCGACCGC
CCGACGTGGG TGCGGATCGA TCTGGATGCG ATCCGCGACA ATGTGCGGAC TTTGCGTTCA
ATTGCTGGCG TGCCCGTGAT GGCGGTGCTC AAGGCGGATG CGTATGGTCA TGGTGCGGTG
CGTGCGGCGC GCGCGGCGCT GGCTGGCGGC GCCGTCGCTC TGGCAGTCGC AACGCTTGGT
GAAGCGCGGA CGTTGCGCGA AGCCGGGATC GGCGCGCCGA TTCTGGCGCT TGGCTACACA
CCGCCGTGGC AGGTGGCGCA GGCAGCGCGG CTGGGTGTCG CCATCACGGT CTTCGACTAT
GATGCAGCAC GCGCCTGTGC CGCTGTCGCC GAGACTGGCG TGCCGGTTCC AGTGCATGTC
GAGGTGGATA CCGGCATGGC GCGCACCGGT TTGAGCGTGG ACGAGTTGGG TCCGTTTCTC
CGCTCGCTTG CCGGATTGCC GGGGGTGCAC GTCGAAGGGT TGTACACCCA TTTTGCCGAT
GCCGACGCTG CGGATCCCGG CGCAGCAGAG GCGCAGTTAC GCCGATTCCG CAGCGCGCTC
GACGCGGTGA CCGGCGCTGG GCTGCGTCCG CCGGTCGTGC ACGCCGCCAA CAGCGCTGCC
ATGTTGCGTC TGCCGGGAGC GCGCTTCGAT ATGGTGCGTC CTGGTATTGC GTGCTACGGG
CTGGCGCCAT CACCCTGGGT TACGCTGCCG GCAGCGTTGC GTCCTGCGCT CTCCTTCCAC
TCTGAGGTGG CGCAGGTGCG TGATCTGCCT CCAGGAACGC CGGTATCGTA TGGCGGCACA
TTTGTCACCC GCCGCCATTC GCGGATTGCG ACCATTCCTG TGGGGTATGC GGACGGCATG
CGCCGTGCAC CGCCGTGGCG CGAAGTGCTG GTGCGCGGTC GGCGCGCCCC AGTTGTCGGG
CGCATCTGCA TGGATTACGC CATGATCGAT GTCACCGATC ATGCGGAAGT CAGGCGCGGT
GATCTGGTAA CGTTGATCGG CGTGCAGGGC GATGCGTGTA TCACCGTTGC TGAGGTCGCC
AGCTGGCTGG GGACGATCAG TTACGACGTG GTGGCGACCA TCCTGCCGCG GGTGCCGCGT
GAAGTGAGTG AATGA
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| Protein sequence | MIDLDDLLAA GGRLASPVYA RQFSGFSYDS RLTAAGELFL ALRTPRGDGH AYIADALAAG
ATGVICEKPP ADLSNTTMIV TDDPALLAAR WAAARLRQVA PRVIGVTGSV GKTSATRAIA
AVLSGLAPTF RSRRSFNSLI GLPVSLARLQ DDHRFAVLEY GTAYPGELHR LTALFPPHVA
VVTSAAPMRL SAFGSVADLV REYGALVAAL PVDGWAVVNG DDPALAGLCD TTRARVLTFG
TGASCDLRGE APQYALNGTR MRVCYRGESV DTVIPLIGEP AVGAALAAVG VALVCGMTLE
RAAERLALVE PPAGRLRPHL ARSSAIVIDD TVGAEPSAML AALRTLAILP AQRRIAVLGD
LPADSSIPGE QNDTYAAIGR LAARTADLLI WKGDAGTHVM RAVQRVRTGM SATLVHTIAG
ALEALPPDLG AGDLVLVCGG ATARLERLVA ALIDPSVNAS QALVRQDAGW RATRIADPDR
PTWVRIDLDA IRDNVRTLRS IAGVPVMAVL KADAYGHGAV RAARAALAGG AVALAVATLG
EARTLREAGI GAPILALGYT PPWQVAQAAR LGVAITVFDY DAARACAAVA ETGVPVPVHV
EVDTGMARTG LSVDELGPFL RSLAGLPGVH VEGLYTHFAD ADAADPGAAE AQLRRFRSAL
DAVTGAGLRP PVVHAANSAA MLRLPGARFD MVRPGIACYG LAPSPWVTLP AALRPALSFH
SEVAQVRDLP PGTPVSYGGT FVTRRHSRIA TIPVGYADGM RRAPPWREVL VRGRRAPVVG
RICMDYAMID VTDHAEVRRG DLVTLIGVQG DACITVAEVA SWLGTISYDV VATILPRVPR
EVSE
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