| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2970 |
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| Symbol | |
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| ID | 5209938 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 3719151 |
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| End bp | 3721574 |
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| Gene Length | 2424 bp |
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| Protein Length | 807 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640596562 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase, NAD-binding |
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| Protein accession | YP_001277284 |
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| Protein GI | 148657079 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.135191 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAGA TCAAGAAAGT GGCCGTCATT GGCGCCGGTA CGATGGGAGG CGGCATCGCC
GCCCACTGCA TCAATGCCGG TTTGCAGGTC GTGCTGCTCG ATACGGTTCC GTCCAGCCTG
ACCCCCGAAG AAGAAAAACG CGGTCTGACG CTCGAGTCGA AGGAGGTGCG CAATCGCTTC
GTCCGGGCAG GTCTGGAGCG GATCAAAAAC GCTCGCCCGG CAGCGCTCTT CGATCCGCAG
TCGATCTCCC GGATCGTGAC CGGTAATGTG GAGGACGACC TCGCCTTGAT CGCGGATGCC
GACTGGATCG TCGAGGCGAT TATCGAGCAA CTCGAACCAA AACGCGCGTT GATGGAAAAG
ATCGAGCAGG TGCGCAAGCC GGGCAGCATC GTTTCATCCA ATACGTCCGG CATCCCGATC
GCCGCCATTG CAGCCGGTCG ATCCGACGAT TTTCGCAGGC ATTTCCTGGG AACGCACTTC
TTCAACCCGC CGCGCTATCT CTACCTCCTC GAAGTCATTC CAACGCCCGA CACTGACCCG
CAGGTCGTTG CAGCGATCAG CCGCTTCGCC GATGTGACGC TTGGCAAAGG CGTGGTGATC
TGCAAGGATC GCCCCAACTT TATCGGCAAC CGCATCTTCA GTTACGATAT TGCCACCACG
GTGGGGTATG CGCTGCGCAA TGGCTACAGC GTCGAAGAGG TCGATGCCCT GACGGGTGAA
TTGATCGGCA GACCGAAAAC GGCAACCTTC CGCCTCCTCG ATCTTGTCGG CATCGATGTG
ATGCTGCATG TGCAACGCAA TCTGTATGCG GCGCTTCCCG ACGACGAGGA GCGTGAGGCG
CTGAAGATCG CGCCTGAAAT CGAGGCGATC GCCGCCAGAG GATGGCTGGG GAACAAGAGC
GGCATCGGTT TCTACAAAGA AACGAAAGGT GCATCCGGGC GCGAGTTCTG GCCCCTCAAT
CTGCAAACGA TGGAGCATGA ACCGCCGAAG AAGCCGCGCT TCGATCTGGT CGGCAAGGCG
CGCAAGATTG AGGACCTCCA TGAGCGGTTG CGCTTCCTGT TCGACAATGC CGATACCGAC
CGCGCTGGCG TCTTTATCCG CGAAACCATG CTGCGTATGC TGGCGTACAC AGCGCGACGC
ATCCCGGAGA TCTCTGAGAG CATCGTCGAT ATCGACCGCG CCATGCGCTG GGGGTTCAGC
CATCAACTTG GTCCTTTCGA GGTGTGGGAC ACCCTCGGGG TGCGGAAGAC AGTCGAGCGC
ATGCGTGAAC GCGACATAGC GATTGCACCA TGGGTCGAAG ACATGCTGGC GAAGGGCGGC
GAGAGTTTCT ATCGCCGCGA GAATGGCCGG ATCGTCAGCG TGTGGAGCCC GATAGACGCG
CAGTATGTCG CATACACGCC GCCGGAAGGG GTGCTGTCGC TCGACGACCT GCGCGCCCAG
GGGAAAGAAG TCGCGCGCAA CCATAGTGCA TCGCTTATCG ACCTGGGAGA TGGCGTGCTC
TGCTTTGAGT TCCACGCCAA GGTGAATGCC ATCGATCCGC TGATCACCGA GATGGGGTGG
AAAGCGCTTG AGCTGCTCCA GGAGGATCGC TGGGTCGGCA TGGTGATCGG CAATCAGTCG
TCCGATTTTT GCGCTGGCGT GAACCTGGGG GTCGTGCTGA TGGGGGTAAT GGGCGGCAAA
CCCGAAGAGT CGGCGAAGTT CGCCAAAGGA ACGCAGGACC TCTTCTTCCG CTTCCGCACC
TGTCCAAAAC CAATCGTGGC TGCGCCGTAT GGCCGCGTGC TCGGCGGCGG CGTCGAAGTC
TGCCTGGCAG CGGCGCGACG GGTGGCAGCC GCTGAGACAT ATATGGGTCT GGTGGAACTG
GGGGTGGGCC TGATCCCCGC CTGGGGCGGG TGCAAGGAGT TTGTTCGCCG GCACGTCTCG
CCGCATGTCA GAACGCCTGG CGCTGATCCG CTTCCCTATC TGCAACAGGC GTTCGAGACG
ATTGCGATGG CGAAGGTCAG TGAGCTGGGC GCCGTTCAGG CGAAGCAACT CGGCTACCTG
ATGGACGACG ACAAGATCGT GATGAACCGC GAGCGGCTGA TCGCCGAAGC AAAGAAGGAA
GTGCTGCTGA TGGTCGCCGA GGGGTATACG CCGGTTCCGC CGGAGGGTGA GCCGGTGTAT
GCTATCGGGC GGCGCGGCAT CGCAGCCGTG AATGCCATGG TCTACGGCAT GCGCCAGGGC
GGCTACATCA GCGATTACGA TATGAAACTG GCGCGCGCGC TGGCGTATGT GATGTGCGGC
GGCGACCTGA CCCAGCCACA GTGGGTCACC GAGCAGTATT TCCTTGACCT GGAGTTCGAG
CAGGCAAGCC AGTTGATCCA GCAACCGAAG ACCCAGGAGC GGATCATGGC GATCCTGCAA
ACCGGCAAGC CGTTGCGGAA TTGA
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| Protein sequence | MTQIKKVAVI GAGTMGGGIA AHCINAGLQV VLLDTVPSSL TPEEEKRGLT LESKEVRNRF
VRAGLERIKN ARPAALFDPQ SISRIVTGNV EDDLALIADA DWIVEAIIEQ LEPKRALMEK
IEQVRKPGSI VSSNTSGIPI AAIAAGRSDD FRRHFLGTHF FNPPRYLYLL EVIPTPDTDP
QVVAAISRFA DVTLGKGVVI CKDRPNFIGN RIFSYDIATT VGYALRNGYS VEEVDALTGE
LIGRPKTATF RLLDLVGIDV MLHVQRNLYA ALPDDEEREA LKIAPEIEAI AARGWLGNKS
GIGFYKETKG ASGREFWPLN LQTMEHEPPK KPRFDLVGKA RKIEDLHERL RFLFDNADTD
RAGVFIRETM LRMLAYTARR IPEISESIVD IDRAMRWGFS HQLGPFEVWD TLGVRKTVER
MRERDIAIAP WVEDMLAKGG ESFYRRENGR IVSVWSPIDA QYVAYTPPEG VLSLDDLRAQ
GKEVARNHSA SLIDLGDGVL CFEFHAKVNA IDPLITEMGW KALELLQEDR WVGMVIGNQS
SDFCAGVNLG VVLMGVMGGK PEESAKFAKG TQDLFFRFRT CPKPIVAAPY GRVLGGGVEV
CLAAARRVAA AETYMGLVEL GVGLIPAWGG CKEFVRRHVS PHVRTPGADP LPYLQQAFET
IAMAKVSELG AVQAKQLGYL MDDDKIVMNR ERLIAEAKKE VLLMVAEGYT PVPPEGEPVY
AIGRRGIAAV NAMVYGMRQG GYISDYDMKL ARALAYVMCG GDLTQPQWVT EQYFLDLEFE
QASQLIQQPK TQERIMAILQ TGKPLRN
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