| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2925 |
|---|
| Symbol | |
|---|
| ID | 5209894 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | - |
|---|
| Start bp | 3661590 |
|---|
| End bp | 3662846 |
|---|
| Gene Length | 1257 bp |
|---|
| Protein Length | 418 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640596521 |
|---|
| Product | amine oxidase |
|---|
| Protein accession | YP_001277243 |
|---|
| Protein GI | 148657038 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1231] Monoamine oxidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.183611 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATGTCA TTGTCCTCGG CGCAGGCGCT TCCGGTCTTG CCGCAGCCCG TCGTCTCCAC
GATGCAGGCG TGACGGTGCA GGTGCTCGAA GCACGGCAGC GCATTGGCGG CAGGATCTGG
ACCGACCACA CCTTTGCGCC ATTTCCTGTC GAACACGGCG CTGAATTCAT CCACGGTGAA
CACGCCGTTA CGCACGCGCT GGTGACGGCT GCCGGTCTGG AGGCGATCCC GGTTGATCGT
TACGGACGGT TGCGTTGGAG CGATGGCGGA TCGGCGCGCA CCATCGATGC GCTGCCACCG
CACCGTCGTG ACCTGATCGG TGCGTTGTTT CGCACATTCG ACCGGTTGCG TGATGTTCCA
CACGATGCGC CGGATCGTTC ACTGGCGCAC TACTTGCGTG AGTGCGGCTT CGACGAAGAG
GCGCTCACGG TAGCGGATGT ATTGCTTGCG CAGACGTGCT GCGCTTCCGT CGAAACATTG
AGTTGCGCCG ATCTCTCGCG TGAACTGCGC GTCGATCACG CAGGCAGGCG CGAGTATCGC
GTGCGCGAGG GGTATGCGGC GCTGCTCGAG TGGTACGCGC GCGGTCTCGA CATTCGTACC
GGCACGGTGG TGCGCCTGGT GCGTCACACT TCTGGCGGCG TGATCATCGA GACCGATGCA
GGCATCTTTC ACGGCGACCG GTGCATTGTC ACCATTCCGG TTGCCGTGTT GCAGCGCGGT
CTTCCGCAGT TTGATCCGCC GCTCAGCGCC CGGAAGCGCC GGGCGATCAA CGCATTGCGC
ATCGAACCGG CGACCAAACT GTTCTATCGG TTCGACGAAC CGATGTGGGA TGCCGACCTG
ACGTTCATGG CGCACAAAGG TCTATCGGCG CGGTGGTGGA CCGCCGCGCA CACAACGCGC
AATGCGGCGG TAATTGTCGC CTATGCAACC GCAGCGCGCG CCCGTGCGCT CGATGCTCTC
GACGATGATG AAGCGCTGGC TGTGGGTCTG GAAGAGTTGC AAACCCTGCT GGGGCGGCGC
GATCTGACGC AGCGGCAGCG CGCGGCGCGG CGAGTCGCGT GGGGCGCCGA TCCCTTCGCA
TATGGCGGAT ATGCGCACGT TCCACCCGGT GCAGCAGACG CGCGCGTCGT GCTGGCGGCG
CCGGAGGGTG CTACGCTCTT CTTCGCAGGC GAGGCAACCG CATACGACAG CAACCCGCAA
ACGGTGCATG GCGCCATCGA AAGTGGGTGG CGCGCTGCGG ATGAGGTGGT CAGATGA
|
|---|
| Protein sequence | MHVIVLGAGA SGLAAARRLH DAGVTVQVLE ARQRIGGRIW TDHTFAPFPV EHGAEFIHGE
HAVTHALVTA AGLEAIPVDR YGRLRWSDGG SARTIDALPP HRRDLIGALF RTFDRLRDVP
HDAPDRSLAH YLRECGFDEE ALTVADVLLA QTCCASVETL SCADLSRELR VDHAGRREYR
VREGYAALLE WYARGLDIRT GTVVRLVRHT SGGVIIETDA GIFHGDRCIV TIPVAVLQRG
LPQFDPPLSA RKRRAINALR IEPATKLFYR FDEPMWDADL TFMAHKGLSA RWWTAAHTTR
NAAVIVAYAT AARARALDAL DDDEALAVGL EELQTLLGRR DLTQRQRAAR RVAWGADPFA
YGGYAHVPPG AADARVVLAA PEGATLFFAG EATAYDSNPQ TVHGAIESGW RAADEVVR
|
|---|
| |