| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2884 |
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| Symbol | |
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| ID | 5209853 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 3598119 |
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| End bp | 3599288 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640596480 |
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| Product | xylose isomerase |
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| Protein accession | YP_001277202 |
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| Protein GI | 148656997 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2115] Xylose isomerase |
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| TIGRFAM ID | [TIGR02631] xylose isomerase, Arthrobacter type |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGACA TGTACGAACC CAAACCCGAA CACAAATTCA CCTTCGGACT CTGGACGGTT
GGCAACATCG GGCGTGATCC GTTCGGCGAA CCGGTGCGCC AGCCTCTTTC GCCGGTCGAA
ATCGTCCATC TGCTGGCGGA AGTTGGCGCG TATGGCGTCA ATTTCCACGA CAACGACCTG
ATCCCGATCG ATGCAACACC GGCGGATCGC GACCGCATTC TACGCGAGTT CAAGGCGGCG
CTCCAGGAAA CCGGCCTCGT TGTGCCGATG GCGACGACCA ACCTCTTTGC CGATCCGGTC
TTCAAGGATG GCGCCTTTAC CTCGAACGAT CCTAAAGTGC GCGCATACGC GCTACAAAAA
ACAATGCGCG CAATCGATCT GGGCGTTGAA TGTGGCGCGA AGGTGTACGT TTTCTGGGGC
GGTCGCGAAG GCGTTGAGAG TGACGCGGCG AAGGATCCGC AGGAAGGGTT GAAACGCTAC
CGCGAAGCGA TCAATTTCCT CTGCGCCTAT GTGAAAGACC AGGGGTACGA CCTGAAATTC
GCGCTCGAAC CCAAGCCGAA CGAGCCGCGC GGCGACATCT ATCTGGCGAC TGTCGGGCAC
GCGCTGGCGT TCATCAACAC GCTCGACTAC CCGGACATGG TCGGGCTGAA CCCGGAAGTC
GCCCATGAAA CAATGGCAGG ACTGAACTTC CTGCACGGCG TCGCGCAGGC GTGGGATGCT
GGCAAACTGT TCCATATCGA CCTGAACGAT CAGGTAATCG GGCGCTACGA TCAGGATTTC
CGCTTCGGAG CGGTCAATCT GAAAGCCGCC TTCTTCCTGG TGCGCTTCCT GGAAAAGGTC
GGGTACCAGG GGAGTCGTCA CTTCGATGCA CACGCCTACC GCACCGAGGA TTATGAAGGG
GTGAAAGCGT TTGCCCGCGG CTGTATGCGC ACCTACCTGA TCTTGAAAGA AAAGGCGCGC
CGCTTTGACG AAGATGCCGA GATTCAGGCG TTGCTGGCGG AAATCTCTGC CGACGACGGC
TCGATGGCGC CGTTCCAGGG CGGCTACAGC CGCGAAAAGG CTGCCGCGCT CAAGGCGCAT
CCGTTCGACC GGGCGGCGCT TGGGCGACGC GGGCTGGCGT ATGAGCGCCT CGATCAACTG
ACGAACGAAT TGTTGCTCGG CGTTCGTTAA
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| Protein sequence | MSDMYEPKPE HKFTFGLWTV GNIGRDPFGE PVRQPLSPVE IVHLLAEVGA YGVNFHDNDL
IPIDATPADR DRILREFKAA LQETGLVVPM ATTNLFADPV FKDGAFTSND PKVRAYALQK
TMRAIDLGVE CGAKVYVFWG GREGVESDAA KDPQEGLKRY REAINFLCAY VKDQGYDLKF
ALEPKPNEPR GDIYLATVGH ALAFINTLDY PDMVGLNPEV AHETMAGLNF LHGVAQAWDA
GKLFHIDLND QVIGRYDQDF RFGAVNLKAA FFLVRFLEKV GYQGSRHFDA HAYRTEDYEG
VKAFARGCMR TYLILKEKAR RFDEDAEIQA LLAEISADDG SMAPFQGGYS REKAAALKAH
PFDRAALGRR GLAYERLDQL TNELLLGVR
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