| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2870 |
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| Symbol | |
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| ID | 5209839 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 3579455 |
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| End bp | 3586030 |
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| Gene Length | 6576 bp |
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| Protein Length | 2191 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640596466 |
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| Product | alpha-2-macroglobulin domain-containing protein |
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| Protein accession | YP_001277188 |
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| Protein GI | 148656983 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2373] Large extracellular alpha-helical protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCGT CGCCACGCTT CCCGCTTCGT GCAATCATTG CCGCTGGCAT CGGACTGATC
CTGATCATCG CCGGTGTGTT CGCCGGCCCG TTGATCCTGA GCGCGCCGCA GATCGTCCGG
ATCGAGCCGC CTGATGGCGC AGAGGCGGTC AATCCGCAGG CGCCGCTGCG GATCGAGTTC
AGTCAACCGG TGCAGCGCGA CTCGCTGGTT GCCGTTGTGC GCCTCGAACC GCCGGTCGAT
GTGCAGATCG ATGTCCAGGG CAATGTTGCG CTGGTGCAAC CCGTCGGCGG GTTGCAGTAC
GGCGCGGAGT ATGCCCTGAC GATTGGCGCG GGTGTGCGGA ACGCGCTTGG TCGCGCCTCC
GAAGGCGCCC AGACGGTGCG TTTCCGCACT GCGCCGTATG TGGCAGTGCG CGATGTCGCG
CCTGCCGATG GCACCGCCGA TATTCCCCTC GAAACACTGA TCACCGTTGA GTTCAGCGCC
CCGGTGGTGA GCGCAGAGAC CGTCGCCGCG TCCGCCGACG ATCCACGCCG CGCCGCCGAT
CTGCCCCAAC CGCTGACACT GACCATCGGC AGTGATTCGA CGGCAGTGAG CGGCATTGGG
CGCTGGCTCT CGCCGACCCG TTTCGGGTTC TTCCCTGAAG GCGGATTGCG TGCTGCGACA
ACCTATCAGG TGACGGTGCG CCCTGACCTG ACACCCGATG GCGCGGCGCG GATGGAGCGC
CCGTTCAGCT GGAGTTTTAC CACCGCAGCA CCGTTGCTGG TCGATACCCG CCCGTTTGAT
GGCGAGTTCG ATGTTGCAGC AGACCGACCA ATCGAAATCC GGCTCCATCG TGACGTGGAT
CGCTCGTCGG CGGGCGCCAG TTTTCGTTTG TTCGACGCGG GCGGGGTGGC GGTCGCGGGT
ACGGTCGAGA CGTTCGATGA CGGTATTCGC TTCAAGCCGG CTGCGCCGCT GCAGCGCGGG
GTACGGTATC GCGCCGTGAT TGAACCGGGA GTCAGCACAA TCTCCGGCGC AATGCTCAAC
ACCAAACCGT TCGAGTGGTC ATTCATCGTC ATCGGCGATC TTGAGGTGCG GCAGGTCGAG
CCTGCTGGCG ATACGCGCGA TGTACCGACC GACATACCGC GGATCAGTGT GCGCTTCAAC
CATCCGGTCG TGCCGCTGGT GGATGTGGCA TCAACCGGCG GATTGCCCGT GGCGGCAACC
GTTGACCCGC CGGTGCGGGG CGTGGCGCGC TGGATCGACA CGTCCACGTT TGTCATTTCG
CTGACGGCAC CGCTCGATCC ATCGACCGAT TACCGGGTGC GGGTTGCCGC CGGATTGACC
GATCAGACCG GCGGCGTGCT GCGCAATGAG TATGTCTGGT CGTTTCGCAC CATCGATCCG
GCGGTGGAGC TGGCGCTCCC GCAAACCGAT TTTGCGTCGC CAACCGAACC GATCACGATC
ACCTTCAACC AGCCGATGGA TCTGATGTCG CTCCGCAGCG CCCTGCGCGT CGTGCGGAGC
GATGGCGCCC TGATCGCTGG CACACTAGCG ATCAGCGGAA CAAGCGTGAT CTTTCGTCCT
GACGCGCTAC TGGATCGCGG CGCTTCCTAT ACCATCATCG TCGATGCCGG TGCACGTTCG
GCGCGCGGCA ACGGGGCGCT GGCGCAGGCG TTCAGCAGTT CGTTCCGCGT CGCGCCGTTG
CCAGCGCTCG TCACGACCAG ACCGGCGCCG GGCGATGTGG TATCGCCTGA TTATGGGAGC
CTGACCCTGA TCTTCAGCAC ACCGATGGAC TGGACAACAG TCAGCCAGAA TCTGGTCATC
GAACCGGCGC TGACCGATGT CTATACGTCG GGATACGAAA CCGGGTTCAC TATCTACGGG
CAGTTCGAGC CTGATACGGA ATATCGTGTC ACCGTCGGGG CGGCAGCGCG CGATCCCTTC
GGCGTCGCAC TGGGGCGCGA TGTGACAGCG ACCTTCCGCG TCGGTCCGCG TGAGCCGTCA
CTCAGTCTGA TCGGTTCCTA CCGCGCCGGT TTTTATCGCG CTGCTGGCAC GGTACGAGTT
CCGATCCAAT GGATCAACGT GCCAGACGTC GAGTGGCGAA TTTCGCGGCT GTCGCCGGAA
CAGGCGGCGA AACTGATGCT GAGTTATGAG TACTGGAGGG ATTTTTCGCC AGCAGCGAAC
GATATTGTGA CCGGGGGAAC GCAATCGCTC GGCGGCGAAC GCAACAAGGG GAGGGTCGGA
ATCATCGAGG TCGGCGCGCT GGAGGCAGGT CTCTACTATC TGGAGTTGCG CGCGTCGGGC
GATCTGGTTG ATCGTCAGGT GATGGCGGTC AGCCCATATG CGCTGACGGT GAAGCGTGGC
ACGGATCGCC TGTTCGTCTG GGCGGTTGAT CTGTCCACCG GCAAGCCGGT TGCGGGACTA
CCGGTGCGTG CTGCCGCCTA CCGGTATGAG ACCGGTCTCA GTACACCCGT CGATCTGGGG
CGCACCAATG CGGACGGTGT GTTGGAAGCG CCGTTCGATG CGCGTGATGT GTGGTCCCTG
TTCGTCTGGT CGTCGGATGG CGACAGGGTG CAGACATTCA CCACCACCGA GTGGTCTTCC
GGGATCGATC CCTGGAGTTT CGGTGTGCCA GCCGACTACC AGCCGCAGAA ATTTGCCGGG
AGTCTGCTGA CCGACAAACC GATCTATCGT CCGGGTCAGA CGGTGCGATT GCGTGGCGCA
TTGCGCGGCA TTGCCGTTAG TGCGGGGCAG GGTCAGGCGG AGCGGTATGT CCTTCCCGGC
GCCGGTGACC GCGCGTATCT GTACGTGAGT GATCCGGAGG GAAACACCGT TTTTTCGACA
ACCCTCACCT TCAGCGCCTT CGGAACATTC AACGTCGACC TGCCGCTGGC GCAGGGAGCG
CCGCTGGGGT CCTACTCGAT GGTAGCGCGG CTCGGTGGTG TGCAGGGAGT CGATGAAACC
GATCCCGCCG TATTCGGCAG TTTTCTGGTT GCCGAGTATC GCGTGCCCGC CTTTGAAGTC
ACTGTCACGC CGGCTGCCAC CGATCTGCTG CGCGGCGATC CGTTGAATGT CAATGTCCAG
GCTGCCTACT TTGCGGGCGG CGCGCCTGCC AGAGCGCCGG TGCGCTGGCG CGTCCTTGCG
CAACCCTTCT GGTTCTTCAG CGACGCGGCG CCAAACTTCA GTTTCGCCGA TTTCGATAAT
GCGTATGCCT GGTATGCCGC CGGTGAACCA TCGTTCCTTT TTGGCGAACT GATTGCTGAA
GGTGAGGGGG CGACTGATGC ACAGGGACGG TTCGCCCTGA CGCTTCCCGC GTCGATCTAT
GAACGCCGTC CTCTGGACAG CGGAGTGCGC ACCGGCAGCC AGACGCTGAC CATCGATGTC
GAGGTGACCG ATGTTGATGG TCAGGTGATC GCCGCCCAGG GGGTGGTAAC GGTTCACGCT
GGCGCGTTCT ACGTCGGTCT GCGCCCTGAA GGATATGTTG CCAGCGCCGG GCAACCGCAG
CAAATCTCAA TCATCACCCT GACGCCTCAA GGCAATCCGG CGCCGAACCG TTCGCTGGAT
GTGGAGGTCT ATGAGCGCGA GTGGTACAGT GTGCGCGAAC AGGGCGCCGA TGGGCGTTTC
TACTGGACAT CCGCCTACAC CGATACGCTG ATCGAGACGC TCTCCGCCGT CACCGACGGG
CAGGGGCGCG GGCAGGTGCA ATTCACGCCG CCGCAGGGCG GTCTCTACCG GATTGTGGCA
AAAGGGAAGG ATGACGCGGG ACGGGTTGTG CAGACGAGCG CCTATACGTG GGCTTCCGGC
GGCATTGTCT TCTGGGGAGT CGATGACAGC AACCGCGTCG ATCTGATCGC CGACAAACGC
CGCTATAAGC CCGGCGACAC TGCAACGATC CTGGTGACGG CGCCCTACCC GGACACGACC
GCGCTACTCA CCATCGAACG CGGCAATGTT ATCGAACATC GCGTTCTGAC GATCCAGGGT
TCGACCGGTG TGTTGCAGGT TCCCATCCGT GAGGAGTATG CGCCAAACGT GTACGTTTCG
CTGACGCTGA TCAAAGCGCC GGGTGACGGC AGCAGCGTCG ATGCGCCCGC CGCGCCCGAT
CTGCGGGTGG GTATCGTGAA ACTGCCGGTC TCAACTGAAC GTCAGGAACT GACCCTGACG
CTCACCCCTG ATAAAACACA GGTCGGTCCG CGCGATACGG TCACTTACAC GGTGAAAGCG
ACCGACTACA CCGGCAAGGG GGTGCGTGCC GAGGTGGCGC TGGCGCTGGT CGATAAGGCG
GTGCTGACGC TGTTTGATGA TCCCAATCCG TCACTGCTCC AGGCGTTCTA CAATCAGCGC
GCGCTTGGCG TATTCACCTC CAACCCGCTG ACGGCGCTGG TTGATCGGGT GACGTTGCGG
CTACAACCGG GCGACAAAGG CGGTGGCGGC GGTCTGGAAG CAGGAACCCT CGTCCGACGC
GATTTTCTCG ATACCGCCTT CTGGAACCCG GCGCTGGTCA CCGATGATAA CGGCATGGCG
CAGTTCAGCG TGACCCTGCC GGACAACCTG ACGACCTGGC GCCTGACGGC GCGCGCCATC
ACCGCCGATA CCCTGGTTGG TGAAGCAACG ATCGACATTG TTTCCAGCAA ACCATTGCTC
CTGCGTCCAA CCCTGCCGCG TGCGCTCACC GTCGGCGACC GCCCGGTGTT GCAGGTGGTG
GTGCAGAACA CCACGAGCGC CGCCATCGAC GCGACAGTGC GGATCGCGCC CAACCCTGCG
CTGACCATTG ACGGACCGAC CGAGCAGCAG GTTAATGTTC CGGCAAACGG AACCGTGCTG
GTGCGCTGGC AGGCGACGGT CAATGAGCCG CCCGGTGAAA GCGATGAAGC GTTGCTGACG
GTACGCGCCG TCGGTGGAGG GTACCAGGAT GCCATCGAGA CGCGGGCGCC GCTGCGTCGG
CTTACTACTG CCGAAGCGAC CGCCAGCGCC GGTCAGGTGA TCGATCAGGT GGTCGAAACG
ATCAAACTGC CGCCGGAGAA AATCGCCAGT GCGCGGGTCG AACTGGATCT CACACCGTCG
CTGGTCGCTG GCATTGTCAA AGGTGTCGAG AAACTGGCGA GCGCGCCGTA CTTCAGCAGC
GAAGCAACTG TCAGCAGTTT TCTGCCAGCA GTCGCGTCCT ACCGTCTGAT CCAGCAGGCG
GGCTTCGACG ACCCGCAGTT GCGCGCAACG CTGGAGCGCA GCGTAACGAA TGGCGTGCAG
CGTCTTTCTG CGCTGCAACA ACTCGATGGC GGTTGGGGAT GGTGGAGCGG CGACCGGAGC
GATCCCTATC TTACGGCGTA TGCCGTTCAG GGTCTGGTGG AGGCGCAACG CGCCGGGTTT
GCCGTGGATC AGTCGATGCT GGATCAGGCG CTGACCTTCC TGACCGAAGC GCTCAATGAC
TCCCGGCGCC TGAACGACCC CAATGACCGC GTCTATGTGC TCTTTGTCCT TGGTGAAGCA
GGGAAGCCGG ATCGTGGACG GTTGGTGAAC CTGTACAACG AACGGAACAA TCTCACACCT
GCCGGAAAAG CCTACCTGCT TATGGCGCTC CAGACGGCTG GGAGCGAGGA GAGTCGCATC
AAGACGCTCC TTGCCGAACT GATGGGGCGG GCCGTGCTGA CGGCATCCGA TGCGCACTGG
GATGCAGGGG ACATGTGGTT CTGGGGACTT GACAGCGACG TGACTACCAC CGGTCTGGCG
TTGCGTGCGC TGTTGCGCGC CGATCCGCAG AACTTCTTAA TTCCTAACGC AGCGCGCTGG
TTGATGGGCG AGCGGGAGCG TGATGTCTGG CGCACGACCT ACGATTCGGC GGGCGCCGTG
CTTGCGCTTG CCGAATACGC GAGCCAGACC GATGACCTGC AAGCCGACTA CCGCTATCGC
GCAACACTCG ACGGGCGCAC CCTCCGCGAA GCGACCGTCA CGCGTGACAC CCTGCGCGAG
ACTGATCGGG TGATCATTGC AGCATCCGAA CTGAAACCCG AAGGCAATCA GGTGGCGCTG
CAACGGCAGG CAAGACCCGG ACAGAGCAGC AAAGGGCGGC TCTACTACAC CGTGCGCCTG
CGCTACGCTG AGGATGTCGC CACTGCTCAG GCGCTTGATC GGGGATTCAT CGTGCAGCGC
GAGTATATCG CCGTCGCCAG CGACACGCTC ACTCCAACCG GGCAACTGAT CACTCAGGCG
CGCCAGGGCG ACCTGGTGCA GGTCCGCATC ACCCTGCGCG TCCCAACCGA TGTGCGCTAC
CTGACCGTGG AGGACTTCCT TCCCGGTGGG TTGGAAGCGC TGGATGCCAG CCTGAAGACA
ACCACTGCAG CAGCGCGGGA AGCGACGCTG GCGCCGCGGA TCGAAGGCGG TGACGCGATG
CCCTACTGGT GGTACTTTAC GCACACCGAA GTGCGCGATG GGCGGGTGGC GCTCTTTGCC
ACCGACCTGC CGAAAGGGGT CTACACCTAC ACCTATCTGG CGCGGGCGAC CGTTCCAGGG
ACATACGTCG CGCTGCCGGC AACTGCGTAT CGAACATATG CGCCGGATGT GTTCGGCAGG
AGCACGGGAG CGTCGTTTAC GATTGTTACG CCGTAA
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| Protein sequence | MKPSPRFPLR AIIAAGIGLI LIIAGVFAGP LILSAPQIVR IEPPDGAEAV NPQAPLRIEF
SQPVQRDSLV AVVRLEPPVD VQIDVQGNVA LVQPVGGLQY GAEYALTIGA GVRNALGRAS
EGAQTVRFRT APYVAVRDVA PADGTADIPL ETLITVEFSA PVVSAETVAA SADDPRRAAD
LPQPLTLTIG SDSTAVSGIG RWLSPTRFGF FPEGGLRAAT TYQVTVRPDL TPDGAARMER
PFSWSFTTAA PLLVDTRPFD GEFDVAADRP IEIRLHRDVD RSSAGASFRL FDAGGVAVAG
TVETFDDGIR FKPAAPLQRG VRYRAVIEPG VSTISGAMLN TKPFEWSFIV IGDLEVRQVE
PAGDTRDVPT DIPRISVRFN HPVVPLVDVA STGGLPVAAT VDPPVRGVAR WIDTSTFVIS
LTAPLDPSTD YRVRVAAGLT DQTGGVLRNE YVWSFRTIDP AVELALPQTD FASPTEPITI
TFNQPMDLMS LRSALRVVRS DGALIAGTLA ISGTSVIFRP DALLDRGASY TIIVDAGARS
ARGNGALAQA FSSSFRVAPL PALVTTRPAP GDVVSPDYGS LTLIFSTPMD WTTVSQNLVI
EPALTDVYTS GYETGFTIYG QFEPDTEYRV TVGAAARDPF GVALGRDVTA TFRVGPREPS
LSLIGSYRAG FYRAAGTVRV PIQWINVPDV EWRISRLSPE QAAKLMLSYE YWRDFSPAAN
DIVTGGTQSL GGERNKGRVG IIEVGALEAG LYYLELRASG DLVDRQVMAV SPYALTVKRG
TDRLFVWAVD LSTGKPVAGL PVRAAAYRYE TGLSTPVDLG RTNADGVLEA PFDARDVWSL
FVWSSDGDRV QTFTTTEWSS GIDPWSFGVP ADYQPQKFAG SLLTDKPIYR PGQTVRLRGA
LRGIAVSAGQ GQAERYVLPG AGDRAYLYVS DPEGNTVFST TLTFSAFGTF NVDLPLAQGA
PLGSYSMVAR LGGVQGVDET DPAVFGSFLV AEYRVPAFEV TVTPAATDLL RGDPLNVNVQ
AAYFAGGAPA RAPVRWRVLA QPFWFFSDAA PNFSFADFDN AYAWYAAGEP SFLFGELIAE
GEGATDAQGR FALTLPASIY ERRPLDSGVR TGSQTLTIDV EVTDVDGQVI AAQGVVTVHA
GAFYVGLRPE GYVASAGQPQ QISIITLTPQ GNPAPNRSLD VEVYEREWYS VREQGADGRF
YWTSAYTDTL IETLSAVTDG QGRGQVQFTP PQGGLYRIVA KGKDDAGRVV QTSAYTWASG
GIVFWGVDDS NRVDLIADKR RYKPGDTATI LVTAPYPDTT ALLTIERGNV IEHRVLTIQG
STGVLQVPIR EEYAPNVYVS LTLIKAPGDG SSVDAPAAPD LRVGIVKLPV STERQELTLT
LTPDKTQVGP RDTVTYTVKA TDYTGKGVRA EVALALVDKA VLTLFDDPNP SLLQAFYNQR
ALGVFTSNPL TALVDRVTLR LQPGDKGGGG GLEAGTLVRR DFLDTAFWNP ALVTDDNGMA
QFSVTLPDNL TTWRLTARAI TADTLVGEAT IDIVSSKPLL LRPTLPRALT VGDRPVLQVV
VQNTTSAAID ATVRIAPNPA LTIDGPTEQQ VNVPANGTVL VRWQATVNEP PGESDEALLT
VRAVGGGYQD AIETRAPLRR LTTAEATASA GQVIDQVVET IKLPPEKIAS ARVELDLTPS
LVAGIVKGVE KLASAPYFSS EATVSSFLPA VASYRLIQQA GFDDPQLRAT LERSVTNGVQ
RLSALQQLDG GWGWWSGDRS DPYLTAYAVQ GLVEAQRAGF AVDQSMLDQA LTFLTEALND
SRRLNDPNDR VYVLFVLGEA GKPDRGRLVN LYNERNNLTP AGKAYLLMAL QTAGSEESRI
KTLLAELMGR AVLTASDAHW DAGDMWFWGL DSDVTTTGLA LRALLRADPQ NFLIPNAARW
LMGERERDVW RTTYDSAGAV LALAEYASQT DDLQADYRYR ATLDGRTLRE ATVTRDTLRE
TDRVIIAASE LKPEGNQVAL QRQARPGQSS KGRLYYTVRL RYAEDVATAQ ALDRGFIVQR
EYIAVASDTL TPTGQLITQA RQGDLVQVRI TLRVPTDVRY LTVEDFLPGG LEALDASLKT
TTAAAREATL APRIEGGDAM PYWWYFTHTE VRDGRVALFA TDLPKGVYTY TYLARATVPG
TYVALPATAY RTYAPDVFGR STGASFTIVT P
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