| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2866 |
|---|
| Symbol | |
|---|
| ID | 5209835 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | + |
|---|
| Start bp | 3575951 |
|---|
| End bp | 3576451 |
|---|
| Gene Length | 501 bp |
|---|
| Protein Length | 166 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640596462 |
|---|
| Product | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase |
|---|
| Protein accession | YP_001277184 |
|---|
| Protein GI | 148656979 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0801] 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase |
|---|
| TIGRFAM ID | [TIGR01498] 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCAGC ATGAAACAAC CGTCTATATC GGGCTTGGCA GCAACATTGG TGACCGCGTT
GCCCGGCTAC GGGAATCGGT CGTGCGTTTG AGCCAGGTCA TCAAGGTTAC GCGCGCCTCA
CGCCTGTATG TGCAGGCGCC GCTGGGCTAT GTCAGCCAGC ATGCGTTCAT CAATGCAGTG
GTTGAAGGTC GCACGACGCT CAAGCCGTTC GATCTGCTGG TTGAACTGCA AAAGATCGAA
CGTGCTATGG GGCGGCGCCG GGGGATTCAG TACGGTCCGC GCCCTATCGA TCTTGACATT
CTCTTTTACG GTACGGCGCA GATGGAGTCG TTTGAATTGA CCATCCCCCA CCCCCGTCTG
GCTCAGCGCG CATTCGTCCT GAAGCCGCTT GCCGAACTTG CGCCCGATCT GATGCACCCG
GTGTTGTACT ATACCGTCAC CCAGTTACTT GCCGATGTCG ATGATGCCGA CCAGGTGAAA
CTGTACGATC CAGGCGTCTG A
|
|---|
| Protein sequence | MAQHETTVYI GLGSNIGDRV ARLRESVVRL SQVIKVTRAS RLYVQAPLGY VSQHAFINAV
VEGRTTLKPF DLLVELQKIE RAMGRRRGIQ YGPRPIDLDI LFYGTAQMES FELTIPHPRL
AQRAFVLKPL AELAPDLMHP VLYYTVTQLL ADVDDADQVK LYDPGV
|
|---|
| |