| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2770 |
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| Symbol | |
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| ID | 5209739 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 3452701 |
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| End bp | 3454512 |
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| Gene Length | 1812 bp |
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| Protein Length | 603 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640596370 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001277092 |
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| Protein GI | 148656887 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.14158 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTCGCA GATGGGTTTT GATGCAGGCG ATTCTTCCGG TAGTGATGGT GGTGGCGCTG
GTGGCGTGTG GTGGTTCTCA ACAGCCCCAG GTTCAGCAAC CCACGGCGCC AGCAGTGCAG
GCAACCGATG TACCGCAACC AACTGTAGCG CTGGCTCCAA CGAACGCGCC AACCGCAGCC
CCCCGGACTG GAGGGAAACT CACAATTCTC TCCTGGCAGG CGGTAACGAC GCTTAACCCG
CATCTGGCGA CCGGCGTCAA GGACTTTAAC GGCGCTACGG TTATGCTTGA ACCACTGGCT
CGCTACAATG AGCGGGACGA ACTGGTTCCA TTTCTGGCGG CTGAAATTCC GACCATCGAG
AATGGTGGTA TTGCCGCCGA CGGTACCAGC GTGACCTGGA AGATCAAGCC GGGCTTGAAG
TGGTCAGACG GCAGTGATTT CACGATTGAC GACATCATCT TCACCTGGCG CTACTGTGTT
GATGAAGCGA CTGGCTGCAC CAACAAAACA TCATTTGACT CGATTGCCAG TATCGAGCCA
ATTGATGCTA CGACCTTCAA GATCACGTGG AAGGAACCGA ACCCCAATCC ATACATCTCC
TTTGTTGGTT CGTCGGGTAT GATTCTGCAA CAGAAGCAAT TTGCGAACTG TATCGGCTCT
GCTGCGAATA CCAGTGCCGA GTGTCAGGCG GCGAATCTCG CTCCGATTGG GACCAATGCC
TGGAAATTAC GCGAGTTCCG TCCCGGTGAT ACGGTGATCT ACGAGCGCAA CCCCTTTTAT
CGCGATGCCG ATAGCGTCTT CTTTGATACG GTCGAGATCA AAGGGGGTGG CGACGCCGCC
TCGGCAGCGC GTGCCGTCTG TACGACGGCG GAAGCCGATT TTGCCCTGAA CCTGCAAATT
CCCAAGGCGG TCCTGGAGCC GATCCTGGCC AGTGGCAACT GTGATGTGAT TGCCGGTGGT
TCGACCGGCG GTGTGGAGCG GATTGTGATC AACTTTGCCA ATCCCGATCC GGCGTTGGGC
GATAAGCGCA GCGAGCCTGA TCAGCCCCAT CCGTTCTTGA CCGATCCGGC GGTACGGCGG
GCGATTGCCC TGGCGATTGA TCGCAAGGCG ATTGCCGAAC AGCTCTACGG TCCAACCGGT
GCGCCGACCT GTAACCTGCT CGTTGTACCC GCAAGTGTCA ATTCGCCCAA CACGACGTGT
GAGCGCAATG TCGAAGAAGC AAAGCGCATT CTGGATGAGG CTGGCTGGGT GCTCAAGGGT
TCAGTGCGCG AGAAGGATGG TATCAGGCTG ATCGTTACTT TCCAGACCAG CGTTAATACC
TTGCGTCAGA GCACGCAATC AGTCATTAAG GCGAATCTGG CTGAGATTGG GATTCAGGTT
TACCTCAAGG CTATCGATCC TGCCGTCTTC TTCAGTGGTG ATCCGGGTAA TCCTGATACC
CTGAACAAGT TCTACGCCGA TCTCCAAATG TATACCTTTG GCCCAGCCTC ACCTGATCCG
CAGTCATATC TGGAGGGTTG GATCTGTGCC CAGGTTTCAT CGGCGGCTAA CCGCTGGAAC
GGTAACAATG TCAGTCGCTA TTGCAATCCG GCATACGATG CGCTCTTTGA GCAACTGAAG
ACCGAGTTCG ATCCACAACG TCGGGCGCAA TTGGCTATTC AGATGAACGA CCTGTTGGTG
AACGACATCG TAGAAATCCC GTTGATCAAC CGGTATACGC CAGCAGTCAA GCTGAAGAAC
CTGACCGGTC CAACGTTCAA CACCTTTGAC AGCAGTCTCT GGAATATTGC TTCCTGGAGG
CGAATACCGT AA
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| Protein sequence | MFRRWVLMQA ILPVVMVVAL VACGGSQQPQ VQQPTAPAVQ ATDVPQPTVA LAPTNAPTAA
PRTGGKLTIL SWQAVTTLNP HLATGVKDFN GATVMLEPLA RYNERDELVP FLAAEIPTIE
NGGIAADGTS VTWKIKPGLK WSDGSDFTID DIIFTWRYCV DEATGCTNKT SFDSIASIEP
IDATTFKITW KEPNPNPYIS FVGSSGMILQ QKQFANCIGS AANTSAECQA ANLAPIGTNA
WKLREFRPGD TVIYERNPFY RDADSVFFDT VEIKGGGDAA SAARAVCTTA EADFALNLQI
PKAVLEPILA SGNCDVIAGG STGGVERIVI NFANPDPALG DKRSEPDQPH PFLTDPAVRR
AIALAIDRKA IAEQLYGPTG APTCNLLVVP ASVNSPNTTC ERNVEEAKRI LDEAGWVLKG
SVREKDGIRL IVTFQTSVNT LRQSTQSVIK ANLAEIGIQV YLKAIDPAVF FSGDPGNPDT
LNKFYADLQM YTFGPASPDP QSYLEGWICA QVSSAANRWN GNNVSRYCNP AYDALFEQLK
TEFDPQRRAQ LAIQMNDLLV NDIVEIPLIN RYTPAVKLKN LTGPTFNTFD SSLWNIASWR
RIP
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