Gene RoseRS_2719 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_2719 
Symbol 
ID5209688 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp3380981 
End bp3382801 
Gene Length1821 bp 
Protein Length606 aa 
Translation table11 
GC content60% 
IMG OID640596320 
ProductABC transporter related 
Protein accessionYP_001277042 
Protein GI148656837 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCCGC TTCGCCGCTC GCTGACGTTC TTGAAGCCGT ATCTCTGGCT CGCTTTTGGC 
GCATTTGTAA GCCTTGTCCT GGCGGCTGGC GCCAACCTTG TCACGCCACA AGCCCTGCGA
CTGCTGATCG ATCAGGGCAT CGCAGGACGC AATCCGGGTG CGCTGGCATG GCTGTCGGTT
GCACTGGTGG GGATCGCGAT TATTCGCGGC GTGTTCAGTT TCACGTCCGG TTTCTGGTCT
GAAAAAGCGT CACAGGCGGT TGCCTACGAT CTGCGCAACG CGCTCTTCGC CAAAATTCAG
GGGCTGAGTT TTTCCTATCA CGATCGGGCG CAGACCGGGC AGTTAATGAC CCGGATCACC
AGTGATGTCG AACAGGTTCG CACCTTCATC GGCATGGGTC TGTTGCAGTT ATTGAACGCC
GCTGCGCTGA TTATCGGGTG CATCACGGCG ATGCTGCTGA TGAACTGGCA ACTGGCGCTG
CTCGTGCTGC TGACCGTGCC ATTGATGGCG GGAGTCATCG GCTTCTTCAT GAATGTGGTG
CGACCGCTGT TCGATCAGAT CCAGCAGCGG TTGGGCGCGC TCAACACGGC GTTGCAGGAG
AATCTTGCCG GTGTGCGGGT GGTGCAGGCA TTCGCCCGTG AACCGTATGA GTGGCAGCGC
TATGGTCGCC TGAATCAGCG TCTGCTCGAC GCCAACCTGC AATCGATCCG CGCCATGTCG
CTGGCATTCC CCCTGATCTT CTTTATCGGC AACCTTGGTA CGCTGGCGGT GATCTGGTTT
GGCGGGTATC AGGTGATCGG CGGAGCATTG ACCATCGGCG AACTTGTAGC GTTCAACACC
TACCTGGCGT TGCTGATCAT GCCGCTGATG ATGCTGGGCA TGATCATGGC GCAGCTGGCT
CGTGCAGCGG TGAGCGCCGA GCGCATCTTC GAAGTGCTCG ATGTCGAAAG CGAAGTGCAT
GACCGTCCCG GCGCTCGTCC GCTTCCGCCG GTCAAGGGGC GCGTTGTGTT CGATCATGTC
TGGTTTGGCT ATGGCGTCAG GGCGAACGAC CATCCGGCGT CCGATGCGCG GCGCCCGATA
CGCGAGGAGA AGTACATCCT CAAAGATGTC TCATTTGTTG CCGAGCCAGG ACAGACGGTG
GCAATCCTGG GGAAGACCGG CGCCGGGAAG AGTACAATTA TCAATCTCAT CCCGCGTTTC
TACGATGTCA CCCACGGTCG CGTCACTATC GACGGGATCG ATGTGCGTGA CGTAACGCTC
GAAAGTCTGC GGGCGCAGAT CGGAATCGTG TTGCAGGATA CCACGCTGTT CAGCGGCAGC
GTGCGCGACA ATATTGCCTA CGGTCGCCCC GATGCGACCG ATGCCGAAGT CGAAGCAGCT
GCACGCGCGG CGCAGGCGCA CGAGTTCATT ACTGCCCTGC CCAACGGATA CAACACGATC
ATCGGCGAGC GCGGCGTTGG ATTGTCGGGC GGTCAGAAGC AGCGGATCGC CATCGCGCGC
GCCCTTCTGC GTGATCCGCG CATTCTGATC CTCGATGATA GCACCTCGTC CGTCGATGCG
GAAACTGAGT ATCAGATTCA ACTGGCGCTC GAACGACTGA TGGAGGGGCG CACCTCGTTT
GTGATTGCAC AACGCATCAG TACAGTGCGC CGTGCCGATC TGATCCTGGT GCTCGATAAC
GGTCGCATCG TCGCGCAGGG TGCGCACGAG GAGTTGCTGG CGACCAGCGC CCTCTACGGC
GAGATCATCG ACTCGCAGTT TGGCGGTGTG CGAGAAGAGG TCGAGACCGT GGAGGAGGAA
ATGTTGAACG TTGAACGTTG A
 
Protein sequence
MSPLRRSLTF LKPYLWLAFG AFVSLVLAAG ANLVTPQALR LLIDQGIAGR NPGALAWLSV 
ALVGIAIIRG VFSFTSGFWS EKASQAVAYD LRNALFAKIQ GLSFSYHDRA QTGQLMTRIT
SDVEQVRTFI GMGLLQLLNA AALIIGCITA MLLMNWQLAL LVLLTVPLMA GVIGFFMNVV
RPLFDQIQQR LGALNTALQE NLAGVRVVQA FAREPYEWQR YGRLNQRLLD ANLQSIRAMS
LAFPLIFFIG NLGTLAVIWF GGYQVIGGAL TIGELVAFNT YLALLIMPLM MLGMIMAQLA
RAAVSAERIF EVLDVESEVH DRPGARPLPP VKGRVVFDHV WFGYGVRAND HPASDARRPI
REEKYILKDV SFVAEPGQTV AILGKTGAGK STIINLIPRF YDVTHGRVTI DGIDVRDVTL
ESLRAQIGIV LQDTTLFSGS VRDNIAYGRP DATDAEVEAA ARAAQAHEFI TALPNGYNTI
IGERGVGLSG GQKQRIAIAR ALLRDPRILI LDDSTSSVDA ETEYQIQLAL ERLMEGRTSF
VIAQRISTVR RADLILVLDN GRIVAQGAHE ELLATSALYG EIIDSQFGGV REEVETVEEE
MLNVER