Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_2719 |
Symbol | |
ID | 5209688 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 3380981 |
End bp | 3382801 |
Gene Length | 1821 bp |
Protein Length | 606 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640596320 |
Product | ABC transporter related |
Protein accession | YP_001277042 |
Protein GI | 148656837 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCCGC TTCGCCGCTC GCTGACGTTC TTGAAGCCGT ATCTCTGGCT CGCTTTTGGC GCATTTGTAA GCCTTGTCCT GGCGGCTGGC GCCAACCTTG TCACGCCACA AGCCCTGCGA CTGCTGATCG ATCAGGGCAT CGCAGGACGC AATCCGGGTG CGCTGGCATG GCTGTCGGTT GCACTGGTGG GGATCGCGAT TATTCGCGGC GTGTTCAGTT TCACGTCCGG TTTCTGGTCT GAAAAAGCGT CACAGGCGGT TGCCTACGAT CTGCGCAACG CGCTCTTCGC CAAAATTCAG GGGCTGAGTT TTTCCTATCA CGATCGGGCG CAGACCGGGC AGTTAATGAC CCGGATCACC AGTGATGTCG AACAGGTTCG CACCTTCATC GGCATGGGTC TGTTGCAGTT ATTGAACGCC GCTGCGCTGA TTATCGGGTG CATCACGGCG ATGCTGCTGA TGAACTGGCA ACTGGCGCTG CTCGTGCTGC TGACCGTGCC ATTGATGGCG GGAGTCATCG GCTTCTTCAT GAATGTGGTG CGACCGCTGT TCGATCAGAT CCAGCAGCGG TTGGGCGCGC TCAACACGGC GTTGCAGGAG AATCTTGCCG GTGTGCGGGT GGTGCAGGCA TTCGCCCGTG AACCGTATGA GTGGCAGCGC TATGGTCGCC TGAATCAGCG TCTGCTCGAC GCCAACCTGC AATCGATCCG CGCCATGTCG CTGGCATTCC CCCTGATCTT CTTTATCGGC AACCTTGGTA CGCTGGCGGT GATCTGGTTT GGCGGGTATC AGGTGATCGG CGGAGCATTG ACCATCGGCG AACTTGTAGC GTTCAACACC TACCTGGCGT TGCTGATCAT GCCGCTGATG ATGCTGGGCA TGATCATGGC GCAGCTGGCT CGTGCAGCGG TGAGCGCCGA GCGCATCTTC GAAGTGCTCG ATGTCGAAAG CGAAGTGCAT GACCGTCCCG GCGCTCGTCC GCTTCCGCCG GTCAAGGGGC GCGTTGTGTT CGATCATGTC TGGTTTGGCT ATGGCGTCAG GGCGAACGAC CATCCGGCGT CCGATGCGCG GCGCCCGATA CGCGAGGAGA AGTACATCCT CAAAGATGTC TCATTTGTTG CCGAGCCAGG ACAGACGGTG GCAATCCTGG GGAAGACCGG CGCCGGGAAG AGTACAATTA TCAATCTCAT CCCGCGTTTC TACGATGTCA CCCACGGTCG CGTCACTATC GACGGGATCG ATGTGCGTGA CGTAACGCTC GAAAGTCTGC GGGCGCAGAT CGGAATCGTG TTGCAGGATA CCACGCTGTT CAGCGGCAGC GTGCGCGACA ATATTGCCTA CGGTCGCCCC GATGCGACCG ATGCCGAAGT CGAAGCAGCT GCACGCGCGG CGCAGGCGCA CGAGTTCATT ACTGCCCTGC CCAACGGATA CAACACGATC ATCGGCGAGC GCGGCGTTGG ATTGTCGGGC GGTCAGAAGC AGCGGATCGC CATCGCGCGC GCCCTTCTGC GTGATCCGCG CATTCTGATC CTCGATGATA GCACCTCGTC CGTCGATGCG GAAACTGAGT ATCAGATTCA ACTGGCGCTC GAACGACTGA TGGAGGGGCG CACCTCGTTT GTGATTGCAC AACGCATCAG TACAGTGCGC CGTGCCGATC TGATCCTGGT GCTCGATAAC GGTCGCATCG TCGCGCAGGG TGCGCACGAG GAGTTGCTGG CGACCAGCGC CCTCTACGGC GAGATCATCG ACTCGCAGTT TGGCGGTGTG CGAGAAGAGG TCGAGACCGT GGAGGAGGAA ATGTTGAACG TTGAACGTTG A
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Protein sequence | MSPLRRSLTF LKPYLWLAFG AFVSLVLAAG ANLVTPQALR LLIDQGIAGR NPGALAWLSV ALVGIAIIRG VFSFTSGFWS EKASQAVAYD LRNALFAKIQ GLSFSYHDRA QTGQLMTRIT SDVEQVRTFI GMGLLQLLNA AALIIGCITA MLLMNWQLAL LVLLTVPLMA GVIGFFMNVV RPLFDQIQQR LGALNTALQE NLAGVRVVQA FAREPYEWQR YGRLNQRLLD ANLQSIRAMS LAFPLIFFIG NLGTLAVIWF GGYQVIGGAL TIGELVAFNT YLALLIMPLM MLGMIMAQLA RAAVSAERIF EVLDVESEVH DRPGARPLPP VKGRVVFDHV WFGYGVRAND HPASDARRPI REEKYILKDV SFVAEPGQTV AILGKTGAGK STIINLIPRF YDVTHGRVTI DGIDVRDVTL ESLRAQIGIV LQDTTLFSGS VRDNIAYGRP DATDAEVEAA ARAAQAHEFI TALPNGYNTI IGERGVGLSG GQKQRIAIAR ALLRDPRILI LDDSTSSVDA ETEYQIQLAL ERLMEGRTSF VIAQRISTVR RADLILVLDN GRIVAQGAHE ELLATSALYG EIIDSQFGGV REEVETVEEE MLNVER
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