| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2718 |
|---|
| Symbol | |
|---|
| ID | 5209687 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | - |
|---|
| Start bp | 3380457 |
|---|
| End bp | 3380930 |
|---|
| Gene Length | 474 bp |
|---|
| Protein Length | 157 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640596319 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001277041 |
|---|
| Protein GI | 148656836 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR00026] deazaflavin-dependent nitroreductase family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAAC ATCACCCACT CTTTGTTCAA CTGGTCAAAG TGGCGACAGC GACGCACGTG
GCGCTCTATC GGTTGACGCG CGGCGCATTG CCGCATCCGT TTCTGGGGCG CCACTGCATT
CTTCTCGTCA CGACCGGGCG GCGCAGCGGA AAAAAACGCA TTACCCCTCT GCTGTTCGTG
CGTGACGGCG GCGACTACGT TGTGGTTGGC TCGTGGGGCG GCAGCGATAC GCCGCCGCAC
TGGTATCTCA ATGTGCGCGC CGATCCGCGC GTCGTGGTTG AGGATCACGG GCTTGTGACC
TCTGCTGTCG CTATTGAGAT CGATGATCCG GAGGAATATG AGCGATTGTG GCGGCGATTG
GTTGCTATCT ATCCCGCCTA TGAGGAATAT CGGCGGCGCA CAACGCGACG CCTTCCGATT
CTCAGGTTGA GTCCGGTCAG AACGTTGAAA ACGATCAGGG AGCAACGCAT ATGA
|
|---|
| Protein sequence | MAKHHPLFVQ LVKVATATHV ALYRLTRGAL PHPFLGRHCI LLVTTGRRSG KKRITPLLFV
RDGGDYVVVG SWGGSDTPPH WYLNVRADPR VVVEDHGLVT SAVAIEIDDP EEYERLWRRL
VAIYPAYEEY RRRTTRRLPI LRLSPVRTLK TIREQRI
|
|---|
| |