| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2716 |
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| Symbol | |
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| ID | 5209685 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 3376639 |
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| End bp | 3378318 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640596317 |
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| Product | anti-sigma-factor antagonist |
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| Protein accession | YP_001277039 |
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| Protein GI | 148656834 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
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| TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTCGT CTGCCCGCAC AATCACACCT CTTGTTCTCG GACGCGACCT GTCGCTTCGT
TCGCGTCTCA TCCTGGGATA CGGCATTGTC GTCTCCCTGA CGCTGATCTT CGGTCTCTTC
ATGTTCGTTC ACCTGAGCGC CATCCGCAAC CGCCTGGAGC AACTGAGCTC CGATGTCACC
ATCGACACGC GCTACAGCAT TGAGGCATTC ACTGCTATCG CCGATGCGCA ACGCCAGGTG
GATCGGTATC TGCTGCAACC GGACGAGAGC AGATACCGGG ATGCAGTACG CCAGTTCGAT
ACGTTGCAAC GCACAATTGA GCGCCTGCAA CGAGACGCGC ACAACCCGGC AATGCGCGAG
CATCTGAAAC GAATACAGGC GCAGGCAGCA ACCTACCGCC AGATATTCGA CGAGACCAGC
ACCAGCATCA CTGCTCAGCA GCGCATGCGT GACGATCTGT ACACCATGTT CTTGCAGCAA
TACCAGACGA TTGAGCAGGC GATCAGCAAT GCCAGACCGG TGACGTCAGG CGATTATCTG
GCGCTGATGG ATCTGAGCCG GGCGAGTACG CGCCTGCAAC TGGCGTATGT CTGGGTCGGG
CAGATGGAGA GCGACAATAC GATAGGCGCC GCCGATAACG CGATTGCCGA ACTGCGTCAG
GCGCGCACCT TCCTGCGTCG CTATCTCGTT TTGAACAGTC AGACACGAGT CGTCCAACCG
GACGATCTCG AACGGTTGCA GAGCGTTTCT GAAAGTTTTG ATCGCTCGCT CAAAAGTATT
GCCAGCCTGT CGAGCGCCTA CATTCGCACC GAAACGCTGA TCAACAGTCG CCTGAGACCT
CAGGCGGGTC AACTGTCACG TGAAGCGTCT GCGCTCTCGG ACACGGCGCT GTTGCAGTTA
ACGGTTGCCA CGAAGGAGAT CGATCAGGAG ACCGCTCGTA CTCAAACGAT TGGCGGCGGC
GTGCTCGCCA TCCTCCTGGT CGCTGGCATT GCGCTCGGCG TATTGCTGGC GTCGCTGATC
ACCCGTCCGC TGAGTGAACT GGTCGCTGCT ACCGCCCGTC TGGCGCGCGG CGAGGGAGAA
GCTCGCGTTC GACCGCGGGG AGGGCGCGAA CTGGTGCTGC TGGCGCATGC ATTCAACGAT
ATGGCTGCTG AACTTGAGCG CGAGCGCGCC GAGGTGCGTT ATCAGAACAC ACTGCTGGCA
GAGCGCGCAA CTGAACTCGA ACGCGCGCTG GCGCAACTGC ACGAGGAAAC CGCAGCGCGC
GAACAACTCA GCGCAACAGT ACGACAGTTG AGCGTGCCAA TCATTCCAAT CATGGAAGGG
GTGCTGGTTG CGCCGCTGGT TGGGGAGATC GATGCGGAGC GCGCCAGCCT GTTGCAGCGC
CGTCTCCTCG AACGGATCGT CGCGGAACGC GCACAGGCGG CGATCCTCGA CATCACCGGC
GTGCCTGTGG TGGATGCTCA GGTCAGCATC TGGCTGATCC AGGCGACAAC CGCAGCGCGA
TTGCTGGGAG CGCGTTGCAT TCTGGTCGGC ATCAATCCCG AAGTGTCGCA GGCGCTCGTT
GCCAGTGGCG TTGACCTGGG CGATCTGGTG ACCAGAGCCA CACTACGCGA GGGATTGGAA
TATGCGGTAA AGATGCTGCG TCGCTCGTCG TTCGCGATGG TCAATGGTGA TCGGCGTTAA
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| Protein sequence | MASSARTITP LVLGRDLSLR SRLILGYGIV VSLTLIFGLF MFVHLSAIRN RLEQLSSDVT
IDTRYSIEAF TAIADAQRQV DRYLLQPDES RYRDAVRQFD TLQRTIERLQ RDAHNPAMRE
HLKRIQAQAA TYRQIFDETS TSITAQQRMR DDLYTMFLQQ YQTIEQAISN ARPVTSGDYL
ALMDLSRAST RLQLAYVWVG QMESDNTIGA ADNAIAELRQ ARTFLRRYLV LNSQTRVVQP
DDLERLQSVS ESFDRSLKSI ASLSSAYIRT ETLINSRLRP QAGQLSREAS ALSDTALLQL
TVATKEIDQE TARTQTIGGG VLAILLVAGI ALGVLLASLI TRPLSELVAA TARLARGEGE
ARVRPRGGRE LVLLAHAFND MAAELERERA EVRYQNTLLA ERATELERAL AQLHEETAAR
EQLSATVRQL SVPIIPIMEG VLVAPLVGEI DAERASLLQR RLLERIVAER AQAAILDITG
VPVVDAQVSI WLIQATTAAR LLGARCILVG INPEVSQALV ASGVDLGDLV TRATLREGLE
YAVKMLRRSS FAMVNGDRR
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