Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_2677 |
Symbol | |
ID | 5209646 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 3324724 |
End bp | 3328527 |
Gene Length | 3804 bp |
Protein Length | 1267 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640596279 |
Product | glycosyl transferase family protein |
Protein accession | YP_001277001 |
Protein GI | 148656796 |
COG category | [M] Cell wall/membrane/envelope biogenesis [R] General function prediction only |
COG ID | [COG0438] Glycosyltransferase [COG1216] Predicted glycosyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAGCG CGGTGATTGT GCTCACATGG AATGGCGGCG CCGAGGCGAT CGCCTGCCTG CAACGGGTGC GCCAGCTCGA TCCGGCACCC GATATCGTTC TGGTGGTGGA CAACGACTCC CGTGACGGAA CACCGGATCA GATCGCCGCC CTTTTTCCCG TCTTCACACT GATCAGGAAC CCACATAATC TGGGGTATTC CGGCGGAATG AACGTCGGGA TCCGCACGCT GCTGGCGCAC GAATCGCTGC CCGATGTGAT CGTTCTGCTC AATCAGGATA CTCTGGTCGA TCCGGGATGG CTCGGCGCTA TCATCGCCCC CTTCGCCGAT CCTGCAGTAG GCGCGGTGGG GTGCAAAATC CGCTACCCCG ATGGAACAAT TCAGCATGCC GGTCTGACCC TCGACTGGCC CCTGGCACTG TCGCGCCATG TCGGGAGATA TGAGCCAGAT CGCGGGCAGT ATGACAAACC GCGCGATGTC GAGTTCGTTA CTTTTGCAGC TGTCGCTCTG CGACGCCAGG CACTGGAACG TATCGGGCTA TTCGACGAAG GATATCGTCC CGCCTATTTT GAGGACGTCG ATCTCTGCGT GCGCCTGCGA CGCGCTGGCT ATCTGATCCG CTATGAACCG CAGGCGACAC TCATCCATCG AGAGGCGACG TCGCAGCGGG ATCGCCTGAC CCGTAGCGCA CTTGTTCATC GAGGACGGCT ACGCTTTGTG CTGAAAACAT ACGCCCTCGA CGAGATAACC GGTCCTTTCG CACAGGCGGA ACATGACTTT ATCGGAAGTC TCGAACAACC GTCTGAAAAA CGTGCGTTGC GCTGGGCATA CGACAGAACG CTTGCAGACC TTCTGCACAT CTGGCTTGCA CGGCGCGAAA CAAACCAGGA TGTGTCTGAA GCAACAGCCA CAGTACAGCG CCTTCTTCTC AACCTGCAAC ACGAACTGAG CAGGAGTTCC CATCGACGTA TTGCTGCGCG TCTTGCAGAC ATTGAAAACC TGGTAACAGA CCAACCGGCT CTGCTGGCGG CGCGTTACAC ATTGCTCGAC TCGCCGCCGC TTCGTGTGGA TCTGGGCGAA TCCTTTTGCA TCAATGTGGA CGTGCATAAT ATCGGGCGCA TAGCCTGGCG CAGCGCTGGC GCACATCCGA TACGTCTCGG TTATCGGTGG GTCGATCAAG CAGGAGGACG CATCGTCGGA CTTCATCGAT CAGCCATTCC CAAAGACATC CTTCCCGGCG AACACGCCCA TATTGCGTTG CGGATCGATC CTCCTCCTCA ACCTGGGGTG TGGCAGTTGC AGATCAGCCT GGTGGAAGAA TATATTGACT GGTTCAGTAC GTATGGCATT CCACCGCTCT GTGTCGATAT TGAATATGTT CTCGATACAG CGCTGCGTGC GGTTATCTTG AGCGCTAATG TTGCTGCGTA TGACGCGATT GGCAAATATA TCCTGTTCCA GACCCAGACA CTGCGCAGCG CAGGCTATCG TGTCGTGATA CTGGCAGAAC ACGTCGATCA GCGTTTACCG ACCGACATTC TTCTCTCAGT CGTCGCCATT AACTGCCAGA TACCAGACGA ACACTATGCA GTTGCTCTCG AACATCTGCA CCGCGCCGAC CTGATTATTC TCCATTACCC GCTCTTTTAC GACCTCGCCG GATTAGTACG TGATGTTCGT CATGGCGTCG TGCTATTCGA TTACCACGGT ATCACGCCAC CTGACATCTG GGGGGTCGAG TCGCCAGATT ACTACGCCAG GATGGTGCGC GGTGTCACAA ACCTCTCTCT TGTTCAATAC GCCGATTATG CTATCGGGCA TAGCCGTTTC ACCTGTGCAG AGTTGATAGC GACAGGCCTG ATCGACCCAA AGCGCGTTAT TCAGATGGCT TTCCCGATCG TTGCGCATGC AACCCTCTCC GGCGCTCCCG GTTGCGACCT GATCGAACGG TTCGATGTGC GCAACAAACA TGTGCTCCTC TACGTCGGTC GCATGGCGCG CAGTAAGCGC GTCGATATGC TCATTGAAGC GTTGCCTGCA ATTGTGGCGC GTCATCCTGA GACGAAGCTG CTGCTGGTCG GTGATGATCG CCCACTGGTA TACCGGCAGT ATGTGCGCGA AGTCGCGGCG CGTGCGCGTG AACTCGGCGT TGCAGCCTGT GTGCAGTTCA CGGGACAGGT TGACGATACG ACTCTTGATC AGTTGTACTG TGCCTGTGCA GTTTTCGTGA CCGCCAGTAT CCACGAAGGC TTCTGCATGC CGGTTGTTGA GGCAATGGCA CACGGTCGTC CGGTGGTCGC AACGCGTGTG ACGGCGCTAC CGGAAACAGT TGGCGATGCC GGTCTTCTGT TCGATCCGGA CGATATCGCG GGTCTGGCGG ATCAGATATG TCGGTTGCTC GACGACCTCC CGCATCCCGG CGCTCATTGG GATATGTCGC AATTCGGGCG ACTGGTGCCG GTGACAGAGG AAGAAATAGC AGCGCTGCGT CAGCGCAAGA TCGGTATTGT GACGCCCCGC TACGGCGTCG GCGTGCTGGG AGGCGCCGAA CAGGGCATTC GGGGATGGGC GGAACAACTT GCTGCGCGCG GCTACACCGT TGAGGCGCTT ACAACAACGA CGGTCGATAT GTCGAACTGG GGCGACCACG TGCCGCCAGG GGTCGATCAT CTGAACGGCG TAACCATCCG CCGCTTCCGA ACCACCAGCA TCGATGACCG ATGGTTCCAC GCTGTTCGGG AGCAGGCTGA AGCGGGGAAA CTTCCCCGCT TCAGCGAAGA GCAACGGTTC ATGGAGCATA ATCTGCGAAG CGTCGACCTT GAACAATTCA TTGCCCAACA CGCAGAAGAG TATGCCTGCC TGCTCGTCAT CCCCTATCTT TTTGGAACCA GTTACTGGAC AATCCGGACG GCGCCGGAGC GTTCCATTCT TATTCCATGT CTGTACGACG AACCACTGGC ACGTCTTGGC ATCTTTCGCT CAATGCTCGA ACAGGCAGCA GCTATCTTTT TCAACTCTGA AGAAGAAGAA GCGTTCGCAA CTCGTGTTCT TGGTGTAACC AATCCGTACC GCGCGTGTCT GGGATTTGGC TTTCCCGATC ATCCAGAACC GGGTCATCCG CATCGTTTCC GTGAACGTAG CGGCGTTACA GGTCCGTTTC TCCTCTACGC CGGTCGCCTC GAACATGGCA AGAATGTTCC GCAGTTGATC GACTATTTCA TTCGCTACAA AGCAGAACGA CCAGGAGCGC TGACGCTGGC GCTGAGCGGA ACGGGCGACA TTTCCCCGCC TTCGCGTCAC GACATCGTTG CGCTGGGCAT GCTTCCCCGC GAGGTGCTCA ACGATGCTTT CGCCAGCGCG CTGGCGCTCT GTCAACTTTC GCTCAACGAG AGTTTTTCGC TTGTTCTGAT GGAGTCGTGG CTCCAGGGAC GACCGGTGAT CGTGCATGCA GATTGTGCAG TCACCAACGG TCACGTCAAA CGCAGCGGCG GCGGGTATGC AGTCCGTTCA TACGAAGACT TTCGGGCGGC AGTTGATGCA TTGCTGGCGA ATGACGAACA CGCGGCGACG CTTGGTGCGC GCGGCAAGAC TTACGTCATC GAGCGATACA CCTGGAGTCG GTTGCTGCCG CGCATCGAAG AAAACATCGC TCGTTTCAGC CGTCCTCGTT CGCTGTATGC GCGTCTGGCG CAACGCGGCG TGGTGCGCGC GCTGGAGTTT ACCCGGAAAC GCTTCGAGGC GGACTTTCTC GACCTGGTTG AACGTGCGCT TGCCGAAACC AGACCCCAGG CATACGCCGA TTGA
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Protein sequence | MNSAVIVLTW NGGAEAIACL QRVRQLDPAP DIVLVVDNDS RDGTPDQIAA LFPVFTLIRN PHNLGYSGGM NVGIRTLLAH ESLPDVIVLL NQDTLVDPGW LGAIIAPFAD PAVGAVGCKI RYPDGTIQHA GLTLDWPLAL SRHVGRYEPD RGQYDKPRDV EFVTFAAVAL RRQALERIGL FDEGYRPAYF EDVDLCVRLR RAGYLIRYEP QATLIHREAT SQRDRLTRSA LVHRGRLRFV LKTYALDEIT GPFAQAEHDF IGSLEQPSEK RALRWAYDRT LADLLHIWLA RRETNQDVSE ATATVQRLLL NLQHELSRSS HRRIAARLAD IENLVTDQPA LLAARYTLLD SPPLRVDLGE SFCINVDVHN IGRIAWRSAG AHPIRLGYRW VDQAGGRIVG LHRSAIPKDI LPGEHAHIAL RIDPPPQPGV WQLQISLVEE YIDWFSTYGI PPLCVDIEYV LDTALRAVIL SANVAAYDAI GKYILFQTQT LRSAGYRVVI LAEHVDQRLP TDILLSVVAI NCQIPDEHYA VALEHLHRAD LIILHYPLFY DLAGLVRDVR HGVVLFDYHG ITPPDIWGVE SPDYYARMVR GVTNLSLVQY ADYAIGHSRF TCAELIATGL IDPKRVIQMA FPIVAHATLS GAPGCDLIER FDVRNKHVLL YVGRMARSKR VDMLIEALPA IVARHPETKL LLVGDDRPLV YRQYVREVAA RARELGVAAC VQFTGQVDDT TLDQLYCACA VFVTASIHEG FCMPVVEAMA HGRPVVATRV TALPETVGDA GLLFDPDDIA GLADQICRLL DDLPHPGAHW DMSQFGRLVP VTEEEIAALR QRKIGIVTPR YGVGVLGGAE QGIRGWAEQL AARGYTVEAL TTTTVDMSNW GDHVPPGVDH LNGVTIRRFR TTSIDDRWFH AVREQAEAGK LPRFSEEQRF MEHNLRSVDL EQFIAQHAEE YACLLVIPYL FGTSYWTIRT APERSILIPC LYDEPLARLG IFRSMLEQAA AIFFNSEEEE AFATRVLGVT NPYRACLGFG FPDHPEPGHP HRFRERSGVT GPFLLYAGRL EHGKNVPQLI DYFIRYKAER PGALTLALSG TGDISPPSRH DIVALGMLPR EVLNDAFASA LALCQLSLNE SFSLVLMESW LQGRPVIVHA DCAVTNGHVK RSGGGYAVRS YEDFRAAVDA LLANDEHAAT LGARGKTYVI ERYTWSRLLP RIEENIARFS RPRSLYARLA QRGVVRALEF TRKRFEADFL DLVERALAET RPQAYAD
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