Gene RoseRS_2677 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_2677 
Symbol 
ID5209646 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp3324724 
End bp3328527 
Gene Length3804 bp 
Protein Length1267 aa 
Translation table11 
GC content57% 
IMG OID640596279 
Productglycosyl transferase family protein 
Protein accessionYP_001277001 
Protein GI148656796 
COG category[R] General function prediction only
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase
[COG1216] Predicted glycosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAGCG CGGTGATTGT GCTCACATGG AATGGCGGCG CCGAGGCGAT CGCCTGCCTG 
CAACGGGTGC GCCAGCTCGA TCCGGCACCC GATATCGTTC TGGTGGTGGA CAACGACTCC
CGTGACGGAA CACCGGATCA GATCGCCGCC CTTTTTCCCG TCTTCACACT GATCAGGAAC
CCACATAATC TGGGGTATTC CGGCGGAATG AACGTCGGGA TCCGCACGCT GCTGGCGCAC
GAATCGCTGC CCGATGTGAT CGTTCTGCTC AATCAGGATA CTCTGGTCGA TCCGGGATGG
CTCGGCGCTA TCATCGCCCC CTTCGCCGAT CCTGCAGTAG GCGCGGTGGG GTGCAAAATC
CGCTACCCCG ATGGAACAAT TCAGCATGCC GGTCTGACCC TCGACTGGCC CCTGGCACTG
TCGCGCCATG TCGGGAGATA TGAGCCAGAT CGCGGGCAGT ATGACAAACC GCGCGATGTC
GAGTTCGTTA CTTTTGCAGC TGTCGCTCTG CGACGCCAGG CACTGGAACG TATCGGGCTA
TTCGACGAAG GATATCGTCC CGCCTATTTT GAGGACGTCG ATCTCTGCGT GCGCCTGCGA
CGCGCTGGCT ATCTGATCCG CTATGAACCG CAGGCGACAC TCATCCATCG AGAGGCGACG
TCGCAGCGGG ATCGCCTGAC CCGTAGCGCA CTTGTTCATC GAGGACGGCT ACGCTTTGTG
CTGAAAACAT ACGCCCTCGA CGAGATAACC GGTCCTTTCG CACAGGCGGA ACATGACTTT
ATCGGAAGTC TCGAACAACC GTCTGAAAAA CGTGCGTTGC GCTGGGCATA CGACAGAACG
CTTGCAGACC TTCTGCACAT CTGGCTTGCA CGGCGCGAAA CAAACCAGGA TGTGTCTGAA
GCAACAGCCA CAGTACAGCG CCTTCTTCTC AACCTGCAAC ACGAACTGAG CAGGAGTTCC
CATCGACGTA TTGCTGCGCG TCTTGCAGAC ATTGAAAACC TGGTAACAGA CCAACCGGCT
CTGCTGGCGG CGCGTTACAC ATTGCTCGAC TCGCCGCCGC TTCGTGTGGA TCTGGGCGAA
TCCTTTTGCA TCAATGTGGA CGTGCATAAT ATCGGGCGCA TAGCCTGGCG CAGCGCTGGC
GCACATCCGA TACGTCTCGG TTATCGGTGG GTCGATCAAG CAGGAGGACG CATCGTCGGA
CTTCATCGAT CAGCCATTCC CAAAGACATC CTTCCCGGCG AACACGCCCA TATTGCGTTG
CGGATCGATC CTCCTCCTCA ACCTGGGGTG TGGCAGTTGC AGATCAGCCT GGTGGAAGAA
TATATTGACT GGTTCAGTAC GTATGGCATT CCACCGCTCT GTGTCGATAT TGAATATGTT
CTCGATACAG CGCTGCGTGC GGTTATCTTG AGCGCTAATG TTGCTGCGTA TGACGCGATT
GGCAAATATA TCCTGTTCCA GACCCAGACA CTGCGCAGCG CAGGCTATCG TGTCGTGATA
CTGGCAGAAC ACGTCGATCA GCGTTTACCG ACCGACATTC TTCTCTCAGT CGTCGCCATT
AACTGCCAGA TACCAGACGA ACACTATGCA GTTGCTCTCG AACATCTGCA CCGCGCCGAC
CTGATTATTC TCCATTACCC GCTCTTTTAC GACCTCGCCG GATTAGTACG TGATGTTCGT
CATGGCGTCG TGCTATTCGA TTACCACGGT ATCACGCCAC CTGACATCTG GGGGGTCGAG
TCGCCAGATT ACTACGCCAG GATGGTGCGC GGTGTCACAA ACCTCTCTCT TGTTCAATAC
GCCGATTATG CTATCGGGCA TAGCCGTTTC ACCTGTGCAG AGTTGATAGC GACAGGCCTG
ATCGACCCAA AGCGCGTTAT TCAGATGGCT TTCCCGATCG TTGCGCATGC AACCCTCTCC
GGCGCTCCCG GTTGCGACCT GATCGAACGG TTCGATGTGC GCAACAAACA TGTGCTCCTC
TACGTCGGTC GCATGGCGCG CAGTAAGCGC GTCGATATGC TCATTGAAGC GTTGCCTGCA
ATTGTGGCGC GTCATCCTGA GACGAAGCTG CTGCTGGTCG GTGATGATCG CCCACTGGTA
TACCGGCAGT ATGTGCGCGA AGTCGCGGCG CGTGCGCGTG AACTCGGCGT TGCAGCCTGT
GTGCAGTTCA CGGGACAGGT TGACGATACG ACTCTTGATC AGTTGTACTG TGCCTGTGCA
GTTTTCGTGA CCGCCAGTAT CCACGAAGGC TTCTGCATGC CGGTTGTTGA GGCAATGGCA
CACGGTCGTC CGGTGGTCGC AACGCGTGTG ACGGCGCTAC CGGAAACAGT TGGCGATGCC
GGTCTTCTGT TCGATCCGGA CGATATCGCG GGTCTGGCGG ATCAGATATG TCGGTTGCTC
GACGACCTCC CGCATCCCGG CGCTCATTGG GATATGTCGC AATTCGGGCG ACTGGTGCCG
GTGACAGAGG AAGAAATAGC AGCGCTGCGT CAGCGCAAGA TCGGTATTGT GACGCCCCGC
TACGGCGTCG GCGTGCTGGG AGGCGCCGAA CAGGGCATTC GGGGATGGGC GGAACAACTT
GCTGCGCGCG GCTACACCGT TGAGGCGCTT ACAACAACGA CGGTCGATAT GTCGAACTGG
GGCGACCACG TGCCGCCAGG GGTCGATCAT CTGAACGGCG TAACCATCCG CCGCTTCCGA
ACCACCAGCA TCGATGACCG ATGGTTCCAC GCTGTTCGGG AGCAGGCTGA AGCGGGGAAA
CTTCCCCGCT TCAGCGAAGA GCAACGGTTC ATGGAGCATA ATCTGCGAAG CGTCGACCTT
GAACAATTCA TTGCCCAACA CGCAGAAGAG TATGCCTGCC TGCTCGTCAT CCCCTATCTT
TTTGGAACCA GTTACTGGAC AATCCGGACG GCGCCGGAGC GTTCCATTCT TATTCCATGT
CTGTACGACG AACCACTGGC ACGTCTTGGC ATCTTTCGCT CAATGCTCGA ACAGGCAGCA
GCTATCTTTT TCAACTCTGA AGAAGAAGAA GCGTTCGCAA CTCGTGTTCT TGGTGTAACC
AATCCGTACC GCGCGTGTCT GGGATTTGGC TTTCCCGATC ATCCAGAACC GGGTCATCCG
CATCGTTTCC GTGAACGTAG CGGCGTTACA GGTCCGTTTC TCCTCTACGC CGGTCGCCTC
GAACATGGCA AGAATGTTCC GCAGTTGATC GACTATTTCA TTCGCTACAA AGCAGAACGA
CCAGGAGCGC TGACGCTGGC GCTGAGCGGA ACGGGCGACA TTTCCCCGCC TTCGCGTCAC
GACATCGTTG CGCTGGGCAT GCTTCCCCGC GAGGTGCTCA ACGATGCTTT CGCCAGCGCG
CTGGCGCTCT GTCAACTTTC GCTCAACGAG AGTTTTTCGC TTGTTCTGAT GGAGTCGTGG
CTCCAGGGAC GACCGGTGAT CGTGCATGCA GATTGTGCAG TCACCAACGG TCACGTCAAA
CGCAGCGGCG GCGGGTATGC AGTCCGTTCA TACGAAGACT TTCGGGCGGC AGTTGATGCA
TTGCTGGCGA ATGACGAACA CGCGGCGACG CTTGGTGCGC GCGGCAAGAC TTACGTCATC
GAGCGATACA CCTGGAGTCG GTTGCTGCCG CGCATCGAAG AAAACATCGC TCGTTTCAGC
CGTCCTCGTT CGCTGTATGC GCGTCTGGCG CAACGCGGCG TGGTGCGCGC GCTGGAGTTT
ACCCGGAAAC GCTTCGAGGC GGACTTTCTC GACCTGGTTG AACGTGCGCT TGCCGAAACC
AGACCCCAGG CATACGCCGA TTGA
 
Protein sequence
MNSAVIVLTW NGGAEAIACL QRVRQLDPAP DIVLVVDNDS RDGTPDQIAA LFPVFTLIRN 
PHNLGYSGGM NVGIRTLLAH ESLPDVIVLL NQDTLVDPGW LGAIIAPFAD PAVGAVGCKI
RYPDGTIQHA GLTLDWPLAL SRHVGRYEPD RGQYDKPRDV EFVTFAAVAL RRQALERIGL
FDEGYRPAYF EDVDLCVRLR RAGYLIRYEP QATLIHREAT SQRDRLTRSA LVHRGRLRFV
LKTYALDEIT GPFAQAEHDF IGSLEQPSEK RALRWAYDRT LADLLHIWLA RRETNQDVSE
ATATVQRLLL NLQHELSRSS HRRIAARLAD IENLVTDQPA LLAARYTLLD SPPLRVDLGE
SFCINVDVHN IGRIAWRSAG AHPIRLGYRW VDQAGGRIVG LHRSAIPKDI LPGEHAHIAL
RIDPPPQPGV WQLQISLVEE YIDWFSTYGI PPLCVDIEYV LDTALRAVIL SANVAAYDAI
GKYILFQTQT LRSAGYRVVI LAEHVDQRLP TDILLSVVAI NCQIPDEHYA VALEHLHRAD
LIILHYPLFY DLAGLVRDVR HGVVLFDYHG ITPPDIWGVE SPDYYARMVR GVTNLSLVQY
ADYAIGHSRF TCAELIATGL IDPKRVIQMA FPIVAHATLS GAPGCDLIER FDVRNKHVLL
YVGRMARSKR VDMLIEALPA IVARHPETKL LLVGDDRPLV YRQYVREVAA RARELGVAAC
VQFTGQVDDT TLDQLYCACA VFVTASIHEG FCMPVVEAMA HGRPVVATRV TALPETVGDA
GLLFDPDDIA GLADQICRLL DDLPHPGAHW DMSQFGRLVP VTEEEIAALR QRKIGIVTPR
YGVGVLGGAE QGIRGWAEQL AARGYTVEAL TTTTVDMSNW GDHVPPGVDH LNGVTIRRFR
TTSIDDRWFH AVREQAEAGK LPRFSEEQRF MEHNLRSVDL EQFIAQHAEE YACLLVIPYL
FGTSYWTIRT APERSILIPC LYDEPLARLG IFRSMLEQAA AIFFNSEEEE AFATRVLGVT
NPYRACLGFG FPDHPEPGHP HRFRERSGVT GPFLLYAGRL EHGKNVPQLI DYFIRYKAER
PGALTLALSG TGDISPPSRH DIVALGMLPR EVLNDAFASA LALCQLSLNE SFSLVLMESW
LQGRPVIVHA DCAVTNGHVK RSGGGYAVRS YEDFRAAVDA LLANDEHAAT LGARGKTYVI
ERYTWSRLLP RIEENIARFS RPRSLYARLA QRGVVRALEF TRKRFEADFL DLVERALAET
RPQAYAD