Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_2646 |
Symbol | |
ID | 5209615 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 3282971 |
End bp | 3283756 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640596248 |
Product | anti-sigma-factor antagonist |
Protein accession | YP_001276970 |
Protein GI | 148656765 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGGTAG GACTTACTCT AAGCGTGTTT CTGATCCCGG AGCAGACATT TGTGGCGCTT CCGTTCCTCA CCGTCCCGAT TGTGTTGGTC ACTCTTGGAC GACATCGCCT CTCCATTCTA TTGACGCTGG TCAGCGGCAT TGTCGCTGGT GCAGGGCTTG CCTGGTTTGC GCCGTCGGTC GAGGTGGAGC AGGTTATCAT CGGCGACGCG CTGCCGCTCG TCAGCGGCAT TGGATTTGTC ACCCTGCTGG TGATCATCTG GCTCCTGAGC GACCGGTTGC TCACCATCTC CGATGCAGCC GTAGCGCTCG CCGATAAACG CGCGGCGGAA GCCGAAGACG CGCGGCAACG CGCCGAGGAA GCACAATCCA CTATTGCGCA ACAGTATGCT GAACAGCAAC GCCTGCTCGA TCTGGTGAGC GTGCTTGAAA CGCCGGTAAT CGCCATCGCC GAGGGGGTGC TGCTGGCGCC GATCGTCGGT CACCTGGATA GTCGACGCGC CGGGCAGTTG ACGCAGCGGC TCCTGGACGC CGTCTATGCG CAGCGTGCAC GTGCAGTGAT TATCGACATT GCCGGCGTGC CGCTGGTCGA TACACAGGTG GCGCAGTTGC TGATCCGCAC GGCGCAATCC ATCCGTTTGC TCGGCAGCCG TGTCGCGCTG ACAGGGATCT CTTCAGAAAC GGCGATGACG TTGAGCAACC TGGGGATGCG CCTGGAAGAG ATGCAGACCA TGCGCAACCC GCAGGAAGCG ATTCAGGTGA TGACCATGCG TACTGTCAAC CGTTAG
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Protein sequence | MMVGLTLSVF LIPEQTFVAL PFLTVPIVLV TLGRHRLSIL LTLVSGIVAG AGLAWFAPSV EVEQVIIGDA LPLVSGIGFV TLLVIIWLLS DRLLTISDAA VALADKRAAE AEDARQRAEE AQSTIAQQYA EQQRLLDLVS VLETPVIAIA EGVLLAPIVG HLDSRRAGQL TQRLLDAVYA QRARAVIIDI AGVPLVDTQV AQLLIRTAQS IRLLGSRVAL TGISSETAMT LSNLGMRLEE MQTMRNPQEA IQVMTMRTVN R
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