Gene RoseRS_2635 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_2635 
Symbol 
ID5209604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp3269392 
End bp3270459 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content61% 
IMG OID640596237 
Productanti-sigma-factor antagonist 
Protein accessionYP_001276959 
Protein GI148656754 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAGCA CACACGACAA GATGCAGACC GGAACCCCCG ATGCAGCCGG ACTTCTGCGC 
CAATGGCAGA CCCGTATGCT CGACGGTCTG CTGATCGTGC TGATCGTCGT CGGTCTGCTG
GCGATCATCG GTGGCGGTTG GTCGGATTAT ATGGCACGCG GGGCAGAAGC GATACCCCTG
ATTGTCGCCT ATACGACTGC ATATGCGATT GTCCTGGTTA TCGCCCTGGT AAAACGACTC
GGCTTCACAG TACGGGCGAT TGCGCTGCTC GGACTTGTCA TGGCGATGAG CGCCCTCATC
CTCGCCAGTG ATGGTTTGTT GGGGAGCGGA CGGATCGCCT GGATGGGGAG CGTTGTTCTG
GCAGTGGCAC TGTTTGGAGT ACGCGGCGGT ATCGTCGCAC TGGCAATGTC ACTGGCGGGC
TTCAGTATTG TCGGGTGGTT CTACGTCGGG GGAACGCTGA ACGCTGCTCC GGCGCAAATA
GCCGTATTGA ACACATCGCC GTCCTGGATT GGAGCGGTTA CAGTCTACGT ATGTATGACC
TGTCTTGCGG CAGTTCCTTT TATGTATCTT CTGAATCGTC TCAGCACACT GGCGAGCAGC
GCGACCGCCG ATGCCGCGCG AGCGGAGGCG AATGCGCGAC TCGCGGAGGA ACGCGCCGCC
GAACTGGAGC GTCAGACGGT ACGTCTTCAG GAAACCGAAC ACATGCTGCG CACCCTGATT
ACCACCCTGG AGACGCCGAC CGTCCCGCTT GCCAGCGGCG TCCTGCTGGC GCCAATTGTC
GGACAGCTGG ATAGCCGGCG CGCCGAGGCG CTCGTGCATC GTCTGCTCAC CGTCGCCAGC
GCCGAGCGCG CCCGCCTGAT GGTTATCGAC ATCGCAGGCG TGCCCGCATT CGACACCCAG
GTCGCGCAGA GTCTGCTTCG CGCTGCTCAG GCGCTCGAAC TGATCGGTTG CCATGTGGCG
CTGACCGGCA TTTCTCCCAC AACGGCGCAG ACGATGACGA CGCTTGGGAT ACGGATGGAC
AACATTACAA TTGCGCGCTC GCCGCAGGAT ATTCTGGCGC AGCGATAG
 
Protein sequence
MLSTHDKMQT GTPDAAGLLR QWQTRMLDGL LIVLIVVGLL AIIGGGWSDY MARGAEAIPL 
IVAYTTAYAI VLVIALVKRL GFTVRAIALL GLVMAMSALI LASDGLLGSG RIAWMGSVVL
AVALFGVRGG IVALAMSLAG FSIVGWFYVG GTLNAAPAQI AVLNTSPSWI GAVTVYVCMT
CLAAVPFMYL LNRLSTLASS ATADAARAEA NARLAEERAA ELERQTVRLQ ETEHMLRTLI
TTLETPTVPL ASGVLLAPIV GQLDSRRAEA LVHRLLTVAS AERARLMVID IAGVPAFDTQ
VAQSLLRAAQ ALELIGCHVA LTGISPTTAQ TMTTLGIRMD NITIARSPQD ILAQR