Gene RoseRS_2626 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_2626 
Symbol 
ID5209595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp3256182 
End bp3257402 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content54% 
IMG OID640596230 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001276952 
Protein GI148656747 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.640199 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCATA TGAAACAGGG TCGGCACTGG TGGCAACAAC GGTTGACATT GCAGTTGCGC 
CTCGCCATAT GGACGGGTGG ACTCATCGTT ATTTGCAGTC TGAGCTTAGT ACTGTTTATC
AATGTGATAG CCTCCATCGT TATCTCGAAT CGGGCGCCTG GTAATCTGCC GTCAATAGAT
CCAGCAGCCA CAGACATGGC CCCACTTACT GCCATACCGT CATCACCCGC TCCCATGCCC
AAGGCATCTT TGTCACCGCC TCCGCACGCA ACTCCTGCCG CTACTCGACC AGCAGATACG
ACTCCGCAAG CCTTGTTGCG TGATGTACGC ATTATTTCGC TTGTCGGGTT AATATTCATC
GCTTGTTTGG GTAGTGCGAG TGCCTACCTA TTGGCTGGTA TGGCGCTCCG TCCACTGCAT
CAGATCAATC AGACAGTCAA GCAGATCAGT GCTGGAACAT TGGACCGACG GCTTAGACTC
GATGGTCCGC ATGATGAGCT GTATGAGCTT GCAGGGGCTT TCAATGCTAT GCTTGACCGC
CTAAAACAGG GATTTGAGCA GCAGGGTCGC TTTATCGCTG ATGCAGCCCA CGAATTGCGA
ACGCCGCTCG CCGCCTTACG CACCTCGGTT GAGGTGGTAC AGTCCAATTC ACAGGCCACA
GTGGATGAGT ATCGCGCAAT GACGGCTACT TTAGAGCGGG CGCTCATACG GCTTGAGCGA
TTAGTCGGTA ACCTCCTTAT ACTCGCATCC AGTGACGAAC GCATCACGGG TGATACTGTT
GAACTTGGGC CCCTCGTGGA AGAGGTGCTG TTTGATCTAC AGCCGCTTGC GGATGCACAA
GACGTGACAG TGCGGCTACT GGGTGAAGCG GAAACCACGG CGCAGGGCGA TGCTACGTTG
TTGTCGCACG TCTTCAGAAA CTTGATCGAA AACGCGATCC ACTACAACCG TCCTGGTGGT
GAGGTCATAG TCACGCTGCA GCAGGACGAA GGTTGGGCAG TTGTGGAGGT TGCGGATACT
GGGATCGGCA TTGCGACAGA GGAGCAAACC CACCTGTTTG AACGATTTTA CCGCGTGGAT
CGTTCACGAT CTCGGCATTT GGGTGGTGCT GGCTTGGGAC TGTCGATAGT TGCGCACCTT
GTCGAGAAGC ATGGCGGGCA CATTCAGGTC AGTAGTACGC TTGGGGTCGG CAGCCGATTC
ACTGTCCGAT TACCACGGTA G
 
Protein sequence
MMHMKQGRHW WQQRLTLQLR LAIWTGGLIV ICSLSLVLFI NVIASIVISN RAPGNLPSID 
PAATDMAPLT AIPSSPAPMP KASLSPPPHA TPAATRPADT TPQALLRDVR IISLVGLIFI
ACLGSASAYL LAGMALRPLH QINQTVKQIS AGTLDRRLRL DGPHDELYEL AGAFNAMLDR
LKQGFEQQGR FIADAAHELR TPLAALRTSV EVVQSNSQAT VDEYRAMTAT LERALIRLER
LVGNLLILAS SDERITGDTV ELGPLVEEVL FDLQPLADAQ DVTVRLLGEA ETTAQGDATL
LSHVFRNLIE NAIHYNRPGG EVIVTLQQDE GWAVVEVADT GIGIATEEQT HLFERFYRVD
RSRSRHLGGA GLGLSIVAHL VEKHGGHIQV SSTLGVGSRF TVRLPR