| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2624 |
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| Symbol | |
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| ID | 5209593 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 3251830 |
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| End bp | 3255363 |
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| Gene Length | 3534 bp |
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| Protein Length | 1177 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640596228 |
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| Product | cyclic nucleotide-binding protein |
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| Protein accession | YP_001276950 |
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| Protein GI | 148656745 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGCGA TGGCAACGCT CGACGATGTA ATAACTCACG CATCCCAACC AACAGCTGCT
GGCGCCCAAC CGCTTCCGGG CGGCATATGG GCTGCGGTGC GGCGGCGCGT TGCCGAACCT
CCGGCAACAA ACGTCCGGGT CTTCACGATC CTGCGCGAGC GTGGCGTTCA ACAATCGGAA
GAACTACGCT TGTGGACGAT CCTGCGCGAA CGGACGAATC CGCAACTGTA CCGACCACAC
GCCATTCCCG ATGTGGCCGC CGATCCAGTC GTCGAAGGGG GACAGACGCA CTATATTGTA
CGCACCCCAC AGGGCGCCTA TCTCCGCCTG ACCGAAGCGC AGCATGAGGT CTGGCGGGCA
ATGGATGGCA CGCGCACCAT TGCCGAACTG GGGCTGGACG CATTTCGCCG GCATAGCCTG
ATCCTGCCGA TCGGTGAACT GGTCGCAACC CTCAAGGCGG AAGGGTTGCT GCTCGATAAG
CCGGTAGGCG TGTACCGTGC AATCAACGAA GCGCTTGCCA GAGGAACAAC CCGCACATGG
GGACGCCGGA TCAGGCGCGT GTTGACAGGC GCAACGCTCA CCCTGCCCGG CATCGATGCG
TTCTACAGCG CAATCTATCG CTGGGGCGGC AGATTGCTGT TTACCCGCGT TTTTGCCGTG
CTTGCCAGCA TCGTCGCGCT TGCCGGAATT ATCGCCTTCG GACTGGCGAT GAGCAGCGGA
TCCGATACGT ATGAGGTCAT CAGACTCAAC GGCTCGGTGA TGCTGGGGCT GGCAGCACTC
TGGGCAGTCA CGCTTCTGTC CTTCGTGATC CACGAAAGCG CGCATGCACT GGCGGTCAAA
CATTTCGGAC GTGCGCTGAC GCGTGGCGGT GTGATGCTGT ACTACGGCTT GCCTGCCGCC
TTTGTGGACA CCAGCGACAT CTGGCGCTCG CCGCGCTCGG CGCGCATTAT CGTTTCGGCA
GCCGGTCCTG CGGCAGATCT GCTGGTCGGC AGCCTGGCAG CCATCACCGC ATACCTGTCG
CCGGATGCTG CGATTGGGTC GATAGCCTAC AAACTGGCAT TTACCAGTTT CGTGTCGAGC
GTCTTCAATC TGAATCCACT CCTCGAACTC GATGGCTACT ACATTCTTGT CGATCTGCTG
CGGATGCCGG ATCTGCGCCG TCAGGCGCTG GCGTATGTGC GTGGTCCGCT GTGGGACAAA
CTGGGCGCTC ACCTGCGGAT GCGCTCGACG CGCTGGATAC GCCGTGCTTC CAGACATCCG
CAGGCGACGA CGGTCAACCT GGACGAGCGC ACACTGCCGT TCAGTCGCCA GGAGCGCGTG
TTCGCGCTGT ATGGAGCAGC CACGGCGCTT TACACTGCGC TGGCGATCAT CGGCGCCGCC
TGGTTCTGGC GTGCGCAGAT CCTCGAACCC GCGCTCGAAC TGTTGCGGGG AGTCTGGTGG
CAACAAGTGA TCGGCGCGCT GCTGATCCTG ATCGTTGTGC TGCCAGCAGT TGCAGCCGTC
CTGCTGGCTC TGTGGGAAGC AGGGCAAACC ACGGTCGGCT GGCTGGTGCG GCGCGGTTAT
GGACGGCAAC CCGGCCTTCT TTCAGCTTTC GGCGTCCTGC TGGCGATCAG CGCATCGCTG
GCGGTTCTGG CAACCCAGGA GGGTGGGTGG AGATGGGTCG GTCTGGCGCT CGGACCGGCG
CTCTGGATTG TGGCGCTCAA CGCGCTGCTG GCTGTCCGCC CGTACTACCG CGGCGCCGCC
ATCTACCCGG CAATACTGGC GTTGATCGCA ACGACAGCGC TTGCCGGGCT GGCTGGCATC
GCGCGCATGC TCCCCATATC TCCGGGCATC TGGGTGATGC TTGACGGGCT GGCGTTCGTC
GGGTTGCTGA TAGCGGGTTT TACCGCGCTC CTCGATGTGG ATCTGCGCGC CGCGCCGCTG
CGCGAATTGC TGGGGACCGC CGTCCTGCTC ATGGCTGCAT TCGCAATTGG CGGAGCAGCA
CTCTTCAGCG CCCAGACAGT CTACCCCACG GCGGGGGCGC TCACGCTCCT GATCACGGCA
GCGCCAGCAT ACTTCGGCGC GCTGGCGCTG GCGCTCCTCC TGCAACACCT GTTCGGTCTG
GCAGACTCGC GGATGGTCTG GGCGTGGGCG TTGCTCTGGG CAGGCGCCCT GGTCGAAACG
GCCGGCTATA TTGCCGATCT GCACGGGCGC GGTCTGGCGC TCGATGTGCT GGGATCGGGA
TTGTGGGCGA CAGCGTGGCT GGTGCATCTT GCAACACTCC GCCATCTCAC GCTGAGCGAA
TTCCGCTGGG AACACATTCC CAATATGAGC GAAAGCGACC GTCTTGCGCG GGCATTTCAA
TTGACGTACC ATGGGTGTTA TGCAATGCTA CACTCAGTCT ACGGTGAGCG CCGCGCGCGT
GCGCTCGATG ACCGGATGGA CATTCTGGCT GCCACGGCGG ACTGGGATGT CACCCTGGAT
CACGAACGCG CACGGATTGG CGCACAGGTG CGAACTCTCC CGATTGCGGA GCAGGGTGCG
CGGTTTGCTG AAGTGTTACG CTACACCGTC GCCGAGATCG AACAGATTGC CGGTGTTGCA
TTCGCGCGAC GCTGCATTCA GGCGGCATAC GACGCACTGC CCTGGCCCGA ACGTGAGACC
GCCAGCCGCC TCTGCTTCCC CGACACGCCG TGGGCGCGTG AATTGTCGAG TTCGTTTGGT
GACATACGTG CAGCGCGCCT GCGGTTACTG CGGCAGGTGG ATATTTTCCT GAACTGCGAC
GACGAAGAAC TGGAGGCGCT GGCGTCCAGC GTCGTCGAAC AGACCTGCGC TGCGGGCGCG
ATAGTGCTAC GGTCGGGCGC TCCGGTTCCG GGCATCTGGA TTATTGAAGC CGGGGAAATC
ATCGCCCGAC GGGGCGGGCG CATCGTTGCC GAACTGCACC GCGGCGACGT TATCGGCGTC
GAAGAAGTGC TGGGCGGTAA ACCGTGTCTC CACACCTACC GCGCGACGGT CGCATCGAGC
CTGCTCTACC TCCCAGCGGA CGAATTTTTC CGCCTGACTG CCGAACGCGC ACCGCACGCC
GCAGACGGGA TGGAGTCGGT TGAAGTACTG CGTCTGCTGG AGCGCGTGCC GTTGTTCGCC
GACCTGCCGC GCAACACGCT GCGCGGACTG GTCGCCATCG CCGAACAGCG CACCTACCCG
GCGCGCACAG TGGTTGTGCG CCAGGGGACG CCGAGCGGGA CATTCTTCAT CATCCGCAAA
GGCACAGCGG CAGTCGTCCG CCGCGAGGCG GCAACCAACG GAGCGCCGGC AACGACCCGA
CCCATCGCGC GGTTGGGACC GCAGGAATTC TTTGGTGAAC TCGAACTGCT GCGCAATGCG
CCGCCGGTGG CAAGCGTCAT CGCGCTCACA TCGCTCACCG TGCTGGCATT GCCGCATGCC
GCCATCCAGG CGCTGGTTCA CAGCGATGGC GGCGTGTCGC GGAGGCTGGA ACGGATCGGC
AGCGGGCGGT TGAAGGCGTT AGAGGGAGGA GAAAGGCCTC ATGCCGAAGT GTGA
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| Protein sequence | MDAMATLDDV ITHASQPTAA GAQPLPGGIW AAVRRRVAEP PATNVRVFTI LRERGVQQSE
ELRLWTILRE RTNPQLYRPH AIPDVAADPV VEGGQTHYIV RTPQGAYLRL TEAQHEVWRA
MDGTRTIAEL GLDAFRRHSL ILPIGELVAT LKAEGLLLDK PVGVYRAINE ALARGTTRTW
GRRIRRVLTG ATLTLPGIDA FYSAIYRWGG RLLFTRVFAV LASIVALAGI IAFGLAMSSG
SDTYEVIRLN GSVMLGLAAL WAVTLLSFVI HESAHALAVK HFGRALTRGG VMLYYGLPAA
FVDTSDIWRS PRSARIIVSA AGPAADLLVG SLAAITAYLS PDAAIGSIAY KLAFTSFVSS
VFNLNPLLEL DGYYILVDLL RMPDLRRQAL AYVRGPLWDK LGAHLRMRST RWIRRASRHP
QATTVNLDER TLPFSRQERV FALYGAATAL YTALAIIGAA WFWRAQILEP ALELLRGVWW
QQVIGALLIL IVVLPAVAAV LLALWEAGQT TVGWLVRRGY GRQPGLLSAF GVLLAISASL
AVLATQEGGW RWVGLALGPA LWIVALNALL AVRPYYRGAA IYPAILALIA TTALAGLAGI
ARMLPISPGI WVMLDGLAFV GLLIAGFTAL LDVDLRAAPL RELLGTAVLL MAAFAIGGAA
LFSAQTVYPT AGALTLLITA APAYFGALAL ALLLQHLFGL ADSRMVWAWA LLWAGALVET
AGYIADLHGR GLALDVLGSG LWATAWLVHL ATLRHLTLSE FRWEHIPNMS ESDRLARAFQ
LTYHGCYAML HSVYGERRAR ALDDRMDILA ATADWDVTLD HERARIGAQV RTLPIAEQGA
RFAEVLRYTV AEIEQIAGVA FARRCIQAAY DALPWPERET ASRLCFPDTP WARELSSSFG
DIRAARLRLL RQVDIFLNCD DEELEALASS VVEQTCAAGA IVLRSGAPVP GIWIIEAGEI
IARRGGRIVA ELHRGDVIGV EEVLGGKPCL HTYRATVASS LLYLPADEFF RLTAERAPHA
ADGMESVEVL RLLERVPLFA DLPRNTLRGL VAIAEQRTYP ARTVVVRQGT PSGTFFIIRK
GTAAVVRREA ATNGAPATTR PIARLGPQEF FGELELLRNA PPVASVIALT SLTVLALPHA
AIQALVHSDG GVSRRLERIG SGRLKALEGG ERPHAEV
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