Gene RoseRS_2616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_2616 
Symbol 
ID5209585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp3241615 
End bp3243012 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content61% 
IMG OID640596220 
Producthypothetical protein 
Protein accessionYP_001276942 
Protein GI148656737 
COG category[S] Function unknown 
COG ID[COG2308] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.920339 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.35815 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGAAA CGGCGATTGC CGATTATCAC GCGGCGCTTC AGGATGAAGC GATTGCGCGG 
GCGACCTGGG AGGCGTTGAC TGTCGGGCAG CGTGAGTGCA ACCTGTTCTT TGGCGATCGT
CCGCTTGCCA CGGTGATGCG TCCGCGGTTT CTGACACGCC CACAGTACGA TCTGCTCCGA
CGCGGCGTTG GGCTGGTCGT TGCCGCCCTG CAGCGTCTCG GCGACGCCCT GCTGGCGGAT
CCAGCGTTGC GCGCTCGTAT CGCGCTGACG CCGCAAGAGG AGGCGCTGCT GGTGCGCGAT
CCGGGGTATC CATACCATAG CGCCCATTCG CGCATGGATA CGTTTCTCAC TCTTGATGGC
GCATCGCTCC GGTTTGTTGA ATACAACGGC GAAAGTCCGG CGGCAATCGC CTACGAAGAT
GTGCTTGCAG AACTGTTCCT CTCCCTGCCG GCAATGCAGC AGTTCACCAG GACGTATGCC
GTCACACCGT TGCCAGCACG CCAGCGTTTG CTTGATACGC TGCTCGACGC CTGGGCGCAT
TCTGGCGGTT CCGGCTCGCC ACGCATTGCG ATCGTCGACT GGAGCGGGTT GCCGACCCAT
TCGGAGTTTA TGCTGTTTCA AAGGTACTTC TACGATCACG GCATCGAGGC GGTCATCTGC
ACCCCCGACG ATCTGGCGTA CCGTGATGGA CGCCTGATTG CAACCCGTTT CCAGGCAGTC
GAACCGACCG CAGCGCCAGC GTTTCCCATC GATCTGGTCT ACAAGCGCGT GCTGACCAGC
GAGTTGCTCA CGCACTACGG CGCAACCGCG CTCGACCACC CGCTGGTGCG CGCGTATGCC
GACGGCGCGA TCTGCATGGT CAATTCGTTC CGCGCCAAAC TGCTGCATAA AAAAGCGATT
TTTGCCCTGC TGACCGACGA GTCGTTGCAC GATCTGTTCA CGCCCGACGA ACGGGCTGCG
ATTCACGCCC ATGTTCCCTG GACGCGCCTG GTGCGTCCAG GAATGACAAC CTATCAGGGC
GCTGCGATTG ATCTGCTGAC CTTCGCGCAT GCAGAACGCG AGCGTCTGGT GCTCAAACCC
AACGATGAAT ATGGCGGCAA AGGAGTGGTG ATCGGGTGGG AAACCTCGCC CGACGAATGG
GCGCGTGCGC TGGCTGAAGC GTTGCGCACG CCTTCTATTG TTCAAGAGCG CGTCACCATC
GCGTATGAAG AGTATCCGGC AATGGTCGAT GGCGCCGTGC AGATTGGGCG CCGCCTGGTG
GACAGCGACC CATTTGTGTT TGGCGGCGAG GTTCATGGGT GTTTGTGTCG TCTTTCGACG
GTGACGTTGT TGAATGTGAC CGCCGGCGGC GGTTCGACGA CGCCGGTCTT TCTGGTGGAG
AGGGGATCAG AACCATGA
 
Protein sequence
MLETAIADYH AALQDEAIAR ATWEALTVGQ RECNLFFGDR PLATVMRPRF LTRPQYDLLR 
RGVGLVVAAL QRLGDALLAD PALRARIALT PQEEALLVRD PGYPYHSAHS RMDTFLTLDG
ASLRFVEYNG ESPAAIAYED VLAELFLSLP AMQQFTRTYA VTPLPARQRL LDTLLDAWAH
SGGSGSPRIA IVDWSGLPTH SEFMLFQRYF YDHGIEAVIC TPDDLAYRDG RLIATRFQAV
EPTAAPAFPI DLVYKRVLTS ELLTHYGATA LDHPLVRAYA DGAICMVNSF RAKLLHKKAI
FALLTDESLH DLFTPDERAA IHAHVPWTRL VRPGMTTYQG AAIDLLTFAH AERERLVLKP
NDEYGGKGVV IGWETSPDEW ARALAEALRT PSIVQERVTI AYEEYPAMVD GAVQIGRRLV
DSDPFVFGGE VHGCLCRLST VTLLNVTAGG GSTTPVFLVE RGSEP