Gene RoseRS_2612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_2612 
Symbol 
ID5209581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp3238604 
End bp3239152 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content60% 
IMG OID640596216 
Producthypothetical protein 
Protein accessionYP_001276938 
Protein GI148656733 
COG category[R] General function prediction only 
COG ID[COG1399] Predicted metal-binding, possibly nucleic acid-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.801895 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACATGT CAAAACCGAC CACAGATCTG AAGTTCAACG TCGCTCAACT GCTCCGCGAG 
TATGTCGGCG GGTCGCGCAG ATACGACTTT ACCGAGCCGG TCCTGCGTCT CGACGATGTG
CTCGAAATGC GCGACGTCGT CGGCGCGGTG CGATTTACCC GCACCGCCAG TGGTGTCCTG
GTCGATGTGC ATGCTCGCGG AACCGTGGTG ATGGAGTGCG TCCGCTGCCT CAATCCCGCC
GTCCAGCATA TTGAGGTGCG CTTCCGGGAC GAGTTTCACT CACGGATCGA CGTGACGACT
GGCACGCCGC TGCCGCAACC CGATGAGGAA GACCCGTTCT ACCTCGATGA GTTGCATATG
GCGGATGTCG GTGAGATGCT GCGCGAGTAT GTGCTGCTCG AACTGCCGAT GCAGCCGCTC
TGCCGTCCCG ACTGTCGCGG TCTCTGCCCG GAGTGTGGTG CAGATTTGAA TGTCGAGCAG
TGTTCATGCG GCAGCACCAG CATTGATGAA CGGTTCGCCG CGTTGCGTGC ACTGCTGAAG
CCAGAGTAG
 
Protein sequence
MHMSKPTTDL KFNVAQLLRE YVGGSRRYDF TEPVLRLDDV LEMRDVVGAV RFTRTASGVL 
VDVHARGTVV MECVRCLNPA VQHIEVRFRD EFHSRIDVTT GTPLPQPDEE DPFYLDELHM
ADVGEMLREY VLLELPMQPL CRPDCRGLCP ECGADLNVEQ CSCGSTSIDE RFAALRALLK
PE