Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_2565 |
Symbol | |
ID | 5209534 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 3181145 |
End bp | 3181846 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640596169 |
Product | hypothetical protein |
Protein accession | YP_001276891 |
Protein GI | 148656686 |
COG category | [S] Function unknown |
COG ID | [COG1556] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.4396 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAACA GCCGCGAACG CATCATTGAG CGCATCCGCG CCGGGTTGCG CACCACCCGC CCGTTTCTGG ACACCGAATC GGCGCGCGCG CCGCACACCC CACCTCCCTT CGTCCATCCC GTCACCCACG ATGACCTGGC GCAACAGTTC GCCGCCGAAC TGACGAAACT CCAGGCATAC CCGCATTTCT GCGCCGATGA CGAAGCGGCG CTGGAGGTCA TCGCCGATGT GCTTCAGCAG CATCAGGCGC GGGAAGTTAT TGCATGGGAC TTCGAGCGGA TCAATCTGCC TGGTCTCGCT GAACTGCTCC AGCAGCGCGG GGTGACCTGT CTTGATGGAC AGGTTGCAGG TGTGTCGGAG CAGCGCGCGG CGCTGTTGCA GGCGCACGAG CGCGCACCGG TATGTATCTC CGGGGTCGAT GTAGCGATTG CCGAGAGCGC AACCCTGGTC ATTCACAGCG GCGCCGGACG ACCGCGGATG GCATCGCTGC TCGCGCCAGT GTTTATCGCC GTTGTGCGTC GGGATCAGTT CGTGCGCGGG TTGGGTGAAG CGATTGAGCG CATCAAACAG ACGTATGGCG ATGTGTTTGC CGATGCCAGC GCTCTCACCC TGATCACCGG TCCGAGTCGC ACGGCTGACA TCGAACTGAC TCTGACGCTC GGTGTCCACG GACCGCGCGA AGTGCACACA ATAATTATTT GA
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Protein sequence | MNNSRERIIE RIRAGLRTTR PFLDTESARA PHTPPPFVHP VTHDDLAQQF AAELTKLQAY PHFCADDEAA LEVIADVLQQ HQAREVIAWD FERINLPGLA ELLQQRGVTC LDGQVAGVSE QRAALLQAHE RAPVCISGVD VAIAESATLV IHSGAGRPRM ASLLAPVFIA VVRRDQFVRG LGEAIERIKQ TYGDVFADAS ALTLITGPSR TADIELTLTL GVHGPREVHT III
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