Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_2557 |
Symbol | |
ID | 5209526 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 3171080 |
End bp | 3172099 |
Gene Length | 1020 bp |
Protein Length | 339 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640596161 |
Product | dihydroorotase |
Protein accession | YP_001276883 |
Protein GI | 148656678 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0418] Dihydroorotase |
TIGRFAM ID | [TIGR00856] dihydroorotase, homodimeric type |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAACACA CGCTCATTTC ACCGCTCGAC ATGCACATCC ACTTCCGTGA AGGCGCCATG TTGCAGACGG TTGCGCCCCT GTCGGCGCAC GACTTTGCCG GCGGCGTCAT CATGCCCAAT CTGGTTCCAC CGGTGGACAA CCTCGAACGC CTGCTGCACT ACCGGGCTGA GATTGACGCG GCGATAAGCG GCACGGGATT TACTCCCTAC ATGACGCTGT TCTTCCGCGC CTACAGCGAG GCCGAGTTGC GCGCCGCACG ACCGCATATC ATCGGGATCA AACTCTACCC GGCAGGCGTC ACGACCAACA GCCAGGCGGG GGTGCAGCGC ATCCGCGACG CCGAGCCGAC CCTGGCTACG ATGGAGGAAC TCGGCATTCC GCTCCTGGTT CATGGCGAAA CCAGCGGCTT CGTGCTTGAT CGCGAGCGCG AATTCTTGCC GATCTATGCA CATCTGGCGC GGCGCTTTCC GCGCCTGACC ATCGTGATGG AGCATATTAC CACCCGCGAA GCCGTTGCGC TGCTCGATGA GCACCCCAAC CTGTACGCCA CGATCACCCT GCACCATCTG CAGATCACCC TCGACGACGT GGCGGGTGGA TTGTTGCAAC CACACCTGTT CTGCAAACCG ATTGCCAAAC GCCCTGAGGA CCGCGACGCA CTGCTACGTG CCGCACTTGC ACCCCACCCG AAAGTCATGT TCGGCAGCGA CTCCGCACCC CATCCGGTCA GCGCCAAGGA AGCCGCCGCC TGCGCAGCCG GGATTTTCAG CGCACCGGTT GCGCTGCCGC TGCTGACCGA GATCTTTGCG CAGCACGACG CGCTCGACCG GTTGCAAACG TTCGTGTCGG ACAATGCGCA GCGGATCTAT GGCATAACAC CGCCGCAGAA AACCGTGCTC CTCCGACGTG AGGAATGGAG CGTTCCGCTG CGGTACGGCG ATGTGACGCC ATACCGTGCC GGGTGTACGG TCGCGTGGCG GGTGGTGATG AGCCGCTACG ATCCTGTTGG TCACTCCTGA
|
Protein sequence | MEHTLISPLD MHIHFREGAM LQTVAPLSAH DFAGGVIMPN LVPPVDNLER LLHYRAEIDA AISGTGFTPY MTLFFRAYSE AELRAARPHI IGIKLYPAGV TTNSQAGVQR IRDAEPTLAT MEELGIPLLV HGETSGFVLD REREFLPIYA HLARRFPRLT IVMEHITTRE AVALLDEHPN LYATITLHHL QITLDDVAGG LLQPHLFCKP IAKRPEDRDA LLRAALAPHP KVMFGSDSAP HPVSAKEAAA CAAGIFSAPV ALPLLTEIFA QHDALDRLQT FVSDNAQRIY GITPPQKTVL LRREEWSVPL RYGDVTPYRA GCTVAWRVVM SRYDPVGHS
|
| |