Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_2546 |
Symbol | |
ID | 5209515 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 3149427 |
End bp | 3151457 |
Gene Length | 2031 bp |
Protein Length | 676 aa |
Translation table | 11 |
GC content | 80% |
IMG OID | 640596150 |
Product | hypothetical protein |
Protein accession | YP_001276872 |
Protein GI | 148656667 |
COG category | [K] Transcription |
COG ID | [COG2378] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000686535 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.24215 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCGCT GGTCCCGCTG GCTCGCCGCC GCCCCCGCCG TCGCGCAGCG CCTGATCGCC CGCACCCATC GCATTTCCCT CCCCCGCGCC GGTTCCGCCG ATGAGCGCCT CCGCCGCCTG CGCCGCGCCC TCTGCACCCC CGCCGCCGTG CGCGCCGTCT ACGCCACGCT CGACGCCGAT GTCCGTGCTG CGCTCGCCGA TCTGCGCCGC TGCCGGCGCG GTCTCGATGC GGCGACCTTC ACGGCGCGCT ATGGCGCGGT GCGTCCCTGG CGCCAACTGG CGCGCGACCC GCAGCCGCGC TCGGTCGCCG AACGCCTGCT GCTCCTCGGC TGGCTGCTGC CGCGCCCCGC CGCTCCCGGA CGCGCGCCGC GCTTCGCGCT GGCTCCCGAA GTGCGCCGCT GGCTGCCGCA GCCGTTGCGG CTCGCCGATG ACGGCCCCGC GCCCCCGGCG CCGCTCCCGC TGGCGCAGCG CGCCGCCCTC GCCCTGCTGC TCGTCGCCGC CGCCGCGCCG CTGCCGCTCC GCCGCGATGG CGCGCTGCGC CGCGGCGCGC TGCGCCGCCT GCAGCCGCTG CTGCCCGACG CGCCCGCACC GGAGCTCGAG GCGCTCTGCC GCTTCCTGCT GCCGCTGCTG GAGGCGCGCG GGCTGGTGCA GCGCCACGGC GGGCAATGCA CGACGGCGCC GGGGGCGGCG GCGTTTCTGG CGGCGCCGCT TGATGACCAG CGCGCGCGCC TGGTCGAGGC GTGGTTGCAC AGCGCCGCGC CGGACGCCTG GCTGCGCCGC TTGCGCGTGG CGGACAGCGG GCTGGACGCA CCGGCGCTGC GCCGCCGCCT GGTGCAGTGG GCGCAGGCGC TGCCGCCCGA CCGCCTGCTC GCGCCGGAGG CGACGTATGA CGCGCTGGCG GCGACGTTCG GGCCGCTCGC CGATGCGCAC ACCCACGGCT TCCGCGTCGT CCGCCGTCCG CCGTGGCGGC GGCGCAGCGA GGCGCGGGTG TGGCAGGCGG CGCTGCGGGG ACCGCTCGCC TGGCTGGGGG TCGTCGCCTG GCACGACGGA CGGGTGGTGC GTCCGACGAC GTGGGCGCTG GCAGACGGCG CCTGGCGCTA CGGCGCGCCG GGGGAGGTCA CGGCGCCGTT CGGCGCGCTC GACGCCGCAG CGCTGACGCT GGCGCAGGGG GGACGCTGGG TGCGGGGCGA TGCCGGAGGG TTGACGGTGC AGGTCGCGGC TGCGCGCGGC GTGCTGGGGG CGCAGGTGCG GGAATTGCTG GCGCGCCGCG CGGGGGACGC GCCGGACGGG TGGGGGACGC CGACAGACGA GGCGCCGGCG TTGCGCCTGG CGGAGGGGGC GCTGCTGCTG GCGGATGCGC CGGGTGACCT GGAGCAGGCG CTGCGCGGGC GGAGCGTGCG GCGGTATGCG CAGCGGCTGG CGCCGGGCGT CGCGCTGGTG CGGGCGGAAC ACGTCGCGGC GGTGACGCGG GCGCTGGCGC GGCAGGGGAT CGCGGTGGCG GTCGCGGCGG GGAGCGGGGC GGCGGCGGGC GGGGCGCTCC CGGCGGCGCC GCTGGCGCCG GGGGAGTGCG CGGCGCTGCT GGCGGCGTGC GCGTATGCTC GCCGGTACGC GCCGGAGGGG CTGCCGCTGG TCATCCCCGC CACGCTGGAA GCGCGGTTGT GGCAGGGGCT GACGCCGCCG CTGCGCGCGG CGGTGGAGGC GGCGCTGGCG GGGATCGAGG CGCCGGAGGG GCCGGCGGCG GACGGAGGGA CGGACGCGGC GCCGCTGCCG CCTGCGGACC CGGACGCGGC GCTGCGGACG GTGCAGCGGG CGCTGACGCA GCAGCGCCTG GTGACGATTG CCTACGACAC GGGCGGCGAA GGACGGGTCA CGCAGCGCAC GGTGCGACCG CTGGCGCTGG AGCGGCGGGG CGACCAGTGG CTGTTGCACG CCTATTGTTT GCAGCGCCGC GCGGAACGGA CGTTTCGGCT GGACCGGGTG CGGGGGTGTG CGCTGGCGCC GCCTGCGGGG CGTTGGGCGC CGGCGGGCTG A
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Protein sequence | MNRWSRWLAA APAVAQRLIA RTHRISLPRA GSADERLRRL RRALCTPAAV RAVYATLDAD VRAALADLRR CRRGLDAATF TARYGAVRPW RQLARDPQPR SVAERLLLLG WLLPRPAAPG RAPRFALAPE VRRWLPQPLR LADDGPAPPA PLPLAQRAAL ALLLVAAAAP LPLRRDGALR RGALRRLQPL LPDAPAPELE ALCRFLLPLL EARGLVQRHG GQCTTAPGAA AFLAAPLDDQ RARLVEAWLH SAAPDAWLRR LRVADSGLDA PALRRRLVQW AQALPPDRLL APEATYDALA ATFGPLADAH THGFRVVRRP PWRRRSEARV WQAALRGPLA WLGVVAWHDG RVVRPTTWAL ADGAWRYGAP GEVTAPFGAL DAAALTLAQG GRWVRGDAGG LTVQVAAARG VLGAQVRELL ARRAGDAPDG WGTPTDEAPA LRLAEGALLL ADAPGDLEQA LRGRSVRRYA QRLAPGVALV RAEHVAAVTR ALARQGIAVA VAAGSGAAAG GALPAAPLAP GECAALLAAC AYARRYAPEG LPLVIPATLE ARLWQGLTPP LRAAVEAALA GIEAPEGPAA DGGTDAAPLP PADPDAALRT VQRALTQQRL VTIAYDTGGE GRVTQRTVRP LALERRGDQW LLHAYCLQRR AERTFRLDRV RGCALAPPAG RWAPAG
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