Gene RoseRS_2546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_2546 
Symbol 
ID5209515 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp3149427 
End bp3151457 
Gene Length2031 bp 
Protein Length676 aa 
Translation table11 
GC content80% 
IMG OID640596150 
Producthypothetical protein 
Protein accessionYP_001276872 
Protein GI148656667 
COG category[K] Transcription 
COG ID[COG2378] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000686535 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.24215 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCGCT GGTCCCGCTG GCTCGCCGCC GCCCCCGCCG TCGCGCAGCG CCTGATCGCC 
CGCACCCATC GCATTTCCCT CCCCCGCGCC GGTTCCGCCG ATGAGCGCCT CCGCCGCCTG
CGCCGCGCCC TCTGCACCCC CGCCGCCGTG CGCGCCGTCT ACGCCACGCT CGACGCCGAT
GTCCGTGCTG CGCTCGCCGA TCTGCGCCGC TGCCGGCGCG GTCTCGATGC GGCGACCTTC
ACGGCGCGCT ATGGCGCGGT GCGTCCCTGG CGCCAACTGG CGCGCGACCC GCAGCCGCGC
TCGGTCGCCG AACGCCTGCT GCTCCTCGGC TGGCTGCTGC CGCGCCCCGC CGCTCCCGGA
CGCGCGCCGC GCTTCGCGCT GGCTCCCGAA GTGCGCCGCT GGCTGCCGCA GCCGTTGCGG
CTCGCCGATG ACGGCCCCGC GCCCCCGGCG CCGCTCCCGC TGGCGCAGCG CGCCGCCCTC
GCCCTGCTGC TCGTCGCCGC CGCCGCGCCG CTGCCGCTCC GCCGCGATGG CGCGCTGCGC
CGCGGCGCGC TGCGCCGCCT GCAGCCGCTG CTGCCCGACG CGCCCGCACC GGAGCTCGAG
GCGCTCTGCC GCTTCCTGCT GCCGCTGCTG GAGGCGCGCG GGCTGGTGCA GCGCCACGGC
GGGCAATGCA CGACGGCGCC GGGGGCGGCG GCGTTTCTGG CGGCGCCGCT TGATGACCAG
CGCGCGCGCC TGGTCGAGGC GTGGTTGCAC AGCGCCGCGC CGGACGCCTG GCTGCGCCGC
TTGCGCGTGG CGGACAGCGG GCTGGACGCA CCGGCGCTGC GCCGCCGCCT GGTGCAGTGG
GCGCAGGCGC TGCCGCCCGA CCGCCTGCTC GCGCCGGAGG CGACGTATGA CGCGCTGGCG
GCGACGTTCG GGCCGCTCGC CGATGCGCAC ACCCACGGCT TCCGCGTCGT CCGCCGTCCG
CCGTGGCGGC GGCGCAGCGA GGCGCGGGTG TGGCAGGCGG CGCTGCGGGG ACCGCTCGCC
TGGCTGGGGG TCGTCGCCTG GCACGACGGA CGGGTGGTGC GTCCGACGAC GTGGGCGCTG
GCAGACGGCG CCTGGCGCTA CGGCGCGCCG GGGGAGGTCA CGGCGCCGTT CGGCGCGCTC
GACGCCGCAG CGCTGACGCT GGCGCAGGGG GGACGCTGGG TGCGGGGCGA TGCCGGAGGG
TTGACGGTGC AGGTCGCGGC TGCGCGCGGC GTGCTGGGGG CGCAGGTGCG GGAATTGCTG
GCGCGCCGCG CGGGGGACGC GCCGGACGGG TGGGGGACGC CGACAGACGA GGCGCCGGCG
TTGCGCCTGG CGGAGGGGGC GCTGCTGCTG GCGGATGCGC CGGGTGACCT GGAGCAGGCG
CTGCGCGGGC GGAGCGTGCG GCGGTATGCG CAGCGGCTGG CGCCGGGCGT CGCGCTGGTG
CGGGCGGAAC ACGTCGCGGC GGTGACGCGG GCGCTGGCGC GGCAGGGGAT CGCGGTGGCG
GTCGCGGCGG GGAGCGGGGC GGCGGCGGGC GGGGCGCTCC CGGCGGCGCC GCTGGCGCCG
GGGGAGTGCG CGGCGCTGCT GGCGGCGTGC GCGTATGCTC GCCGGTACGC GCCGGAGGGG
CTGCCGCTGG TCATCCCCGC CACGCTGGAA GCGCGGTTGT GGCAGGGGCT GACGCCGCCG
CTGCGCGCGG CGGTGGAGGC GGCGCTGGCG GGGATCGAGG CGCCGGAGGG GCCGGCGGCG
GACGGAGGGA CGGACGCGGC GCCGCTGCCG CCTGCGGACC CGGACGCGGC GCTGCGGACG
GTGCAGCGGG CGCTGACGCA GCAGCGCCTG GTGACGATTG CCTACGACAC GGGCGGCGAA
GGACGGGTCA CGCAGCGCAC GGTGCGACCG CTGGCGCTGG AGCGGCGGGG CGACCAGTGG
CTGTTGCACG CCTATTGTTT GCAGCGCCGC GCGGAACGGA CGTTTCGGCT GGACCGGGTG
CGGGGGTGTG CGCTGGCGCC GCCTGCGGGG CGTTGGGCGC CGGCGGGCTG A
 
Protein sequence
MNRWSRWLAA APAVAQRLIA RTHRISLPRA GSADERLRRL RRALCTPAAV RAVYATLDAD 
VRAALADLRR CRRGLDAATF TARYGAVRPW RQLARDPQPR SVAERLLLLG WLLPRPAAPG
RAPRFALAPE VRRWLPQPLR LADDGPAPPA PLPLAQRAAL ALLLVAAAAP LPLRRDGALR
RGALRRLQPL LPDAPAPELE ALCRFLLPLL EARGLVQRHG GQCTTAPGAA AFLAAPLDDQ
RARLVEAWLH SAAPDAWLRR LRVADSGLDA PALRRRLVQW AQALPPDRLL APEATYDALA
ATFGPLADAH THGFRVVRRP PWRRRSEARV WQAALRGPLA WLGVVAWHDG RVVRPTTWAL
ADGAWRYGAP GEVTAPFGAL DAAALTLAQG GRWVRGDAGG LTVQVAAARG VLGAQVRELL
ARRAGDAPDG WGTPTDEAPA LRLAEGALLL ADAPGDLEQA LRGRSVRRYA QRLAPGVALV
RAEHVAAVTR ALARQGIAVA VAAGSGAAAG GALPAAPLAP GECAALLAAC AYARRYAPEG
LPLVIPATLE ARLWQGLTPP LRAAVEAALA GIEAPEGPAA DGGTDAAPLP PADPDAALRT
VQRALTQQRL VTIAYDTGGE GRVTQRTVRP LALERRGDQW LLHAYCLQRR AERTFRLDRV
RGCALAPPAG RWAPAG