| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2541 |
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| Symbol | |
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| ID | 5209510 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 3141120 |
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| End bp | 3142961 |
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| Gene Length | 1842 bp |
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| Protein Length | 613 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640596145 |
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| Product | ABC transporter related |
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| Protein accession | YP_001276867 |
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| Protein GI | 148656662 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00684037 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGTTAAGAA CAAGTGTTCA CACAATATAC TTTGCCTTGC AACTCGTCTG GCGAACGAAC
TGGCGCGCCG TTGTCGCTCT TGCGGTCGTC ATTCTCCTGG AGAGTCCGAT TCTTGCGTTC
CAACTATGGA TTGGCAAGTT AATCATCGAT GCGATTGTCG CAGCGATAGG CGGCACTCCT
ATCTCCCTTA CGCTTATCTT CGGACTGGTT GCCGCTGAGG GCGGATTGAA AATCCTGAGC
ATCTTGTTTC AGCAGATAAA CCTGGTCGTA CAAAAACGAC TGAACGATCA ACTAAGTGAA
AAGATCAATG GTGATATCCT GGATAGAGTC AATCAGCTCG ATCTACGCTT TTTCGAGACA
GCTGAATATT ACGATAGCCT TGCGCGCGCT CAACAGGAAG CACTCTATCG CCCAACAGAG
ATACTATTAT ACAGTGTTCA GATGTTACAG AGTCTGTTGA CTCTTGTAGC CCTTATCGTC
ATACTTTTAC AATTCAATCC CATTATCTTC ATAGCACTTT TTATTGGCGC TTTTGTTTCG
ATTTTTGGAC AATCCCGACT TGCTGCGTGG GAATTTTCTG TTCTCGATCA TCAAATACCC
GAAACACGCA AGCTCGCCTA TTTGAGTTCC CTGCTTACCA CCAGTGGAGC TACAAAAGAA
ATTCGGATCT TCGGGTTAGG AAATCTCTTT CGTACTGAAT ATCTAAATCT ACTTCGAAAG
CACAATGAGG AGAAACGCAA TGTTGCACAT CATCGTGCCC GGATTGGATT GTTGAGCGGC
ACAATTGGGG CGCTGATCTT TGCTGGTGTA TATTTGTATC TTATTACTGC CGCTCTACGC
CGGGATTTGA GCGTTGGTGA TTTGACCATG CTCACAAGCA CGTTCTTTCA GAGTCAGATA
TACCTTTCCT CACTTATTGG TACGACTGCC GCCCTCTATC AGGCTGGTTT GTTCCTCAAC
CATCTTGAAA GATTTATGTC ATTTTCTCCA GGTATAGTTA GTCCTTCTGA GCCGCAACCA
ATCGTCCATC CACTGGAACG TGGTCTAGAT TTGATCAATG TTTGGTTCAC GTATCCAGAA
GCTAAAGATC CCGTCTTACG CAATATCAAT CTTATCATTC AACCTGGAGA GATCGTTGCG
ATTGTCGGAG AAAATGGTGC AGGCAAAACC ACGCTCATCA AACTCCTCTG TCGGCTCTAC
GATCCTACAC AAGGCGTGAT TATGCTCAAC GGTGTTGACA TAAAATCATA CGATCTTGAT
CAACTAAGAC GCCAATATAG CGTTATATTT CAAGATTTCG TCAATTATCA GGCCACAGTG
CGCGAGAATA TCGGCTATGG TTACATTCCT TCTTTATCCG ATCCTGAACT GGCAGAGATC
AAAAAAGCTG CAGAAAGATC CGGAATACAT TCATTCATCC AGGACTTACC GCGAGGATAT
GACACTCTGG TGGGTAAACT CTTTGAAGAG GGGCACGAAC TCTCCGGGGG GCAATGGCAA
ATGCTTGCAG TGGCGCGCGC ATTGGTACGT CCAGCAACTG TTGTTATTCT GGATGAACCA
ACGGCTTCGC TTAGCCCTGC GTCAGAGGTT GCGTTTTTCC ATCATCTCAA GCGTAGTCTA
TCGAAAGACC AGATCGGTAT TATTATTTCG CATCGTTTCT CAACAGTTCG CATGGCGGAT
CGTATTATTG TACTGGAAAA TGGTGAGATC CGTGAGAATG GACGACATGA GGATCTGATG
GCTCAACAAG GAATTTATGC TCGACTCTAC CGTCTGCAAG CGGCATCGCT GGAAGAAGGC
GCCTCTTCCT TGAGTCTCTG CAGCGAAGTG CAAAACAGTT GA
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| Protein sequence | MLRTSVHTIY FALQLVWRTN WRAVVALAVV ILLESPILAF QLWIGKLIID AIVAAIGGTP
ISLTLIFGLV AAEGGLKILS ILFQQINLVV QKRLNDQLSE KINGDILDRV NQLDLRFFET
AEYYDSLARA QQEALYRPTE ILLYSVQMLQ SLLTLVALIV ILLQFNPIIF IALFIGAFVS
IFGQSRLAAW EFSVLDHQIP ETRKLAYLSS LLTTSGATKE IRIFGLGNLF RTEYLNLLRK
HNEEKRNVAH HRARIGLLSG TIGALIFAGV YLYLITAALR RDLSVGDLTM LTSTFFQSQI
YLSSLIGTTA ALYQAGLFLN HLERFMSFSP GIVSPSEPQP IVHPLERGLD LINVWFTYPE
AKDPVLRNIN LIIQPGEIVA IVGENGAGKT TLIKLLCRLY DPTQGVIMLN GVDIKSYDLD
QLRRQYSVIF QDFVNYQATV RENIGYGYIP SLSDPELAEI KKAAERSGIH SFIQDLPRGY
DTLVGKLFEE GHELSGGQWQ MLAVARALVR PATVVILDEP TASLSPASEV AFFHHLKRSL
SKDQIGIIIS HRFSTVRMAD RIIVLENGEI RENGRHEDLM AQQGIYARLY RLQAASLEEG
ASSLSLCSEV QNS
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