Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_2538 |
Symbol | |
ID | 5209507 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 3130711 |
End bp | 3134442 |
Gene Length | 3732 bp |
Protein Length | 1243 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640596142 |
Product | hypothetical protein |
Protein accession | YP_001276864 |
Protein GI | 148656659 |
COG category | [V] Defense mechanisms |
COG ID | [COG0286] Type I restriction-modification system methyltransferase subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.136229 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00255392 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTCACA TCCACGCACC AACTCCGGCG ATCCGTCTCG AAGGCGGTCT GCTTGGTCCC GACATTCTGG ACGCGGCGCT TGCCGGCGAT CTGCCAGGGC AGCAACCGCG CGATTTCGGG CTGGACGGGT CGCGCTCCCT CACCGATGAG ATCGCTGGCG CCTTCGCCGA CGCCCAGGCG CAGTGGGCGC TCTTCCGCCG CCGCCTGGCG CGCCTGCCGG ACGATGACCC GGCGACCGCA ATCACCCGCG ATGCCTGGGT CATCCCGTTC CTCAGTCTGC TCGGCTACGA CCTGCACGCC AACCCGCACC CGTATGCGAT CGACGGGGCG CGCTTCGCCA TTTCGCACCG CGCTGGCGCT GCGGACGACG CCCCGCCGGT GCATATCGTC GGGGTGCGCC AGGACCTGGG GCGCGTCCCG CCCGCACCCT CCCGAACCGG GGGGGTGCGG ATGGCGCCGC ACGTGCTGGT GCAGGAGTAT CTCAACCGCA GCGAGCAGGT GTGGGGGCTG GTCGCCAACG GGCGCACCCT GCGTCTGCTG CGCAACAGCA CGTACCTCCG GCGGCAGGCG TATGTCGAGT GCGACCTGGC GCAGATCCTC GATGAGCAGC GCTTCGCCGA CTTCGCCGCG CTCTACCGGC TGATCCACCG CACGCGCCTG CCGCAGACCG CTGCGGACGC GCGCGACTGC TGGCTGGAAC GCTACCATCA GCACGCGCTG GAACAGGGCG GACGGGTGCG CGACCGCCTG CGCGACGGCG TGGAACAGGC GCTCCTGATC CTGGCGAACG GCTTCCTGGC GCACCCGGCG AACGGAGCGC TGCGCGCCGC GCTCCGTCTC CCGCCGCCGG GCGAACCGGT CCCGGATGAC GTTGCCGCTG CGCTGTATCG CCAGGCGCTG CGCATCGTCT ACCGCGTGCT CTTCCTGCTG ACCGCCGAAG ATCGCGGGCT GATCAGCGAC GACCCGCACT ACGCGCACTA TGGCGTCGGG CGACTGCGGC GACTCCTGAC GCGCCGCAGC GCCTTCACCG ATCACGTCGA CCTCTGGCTG GGGTTCCAGA CGCTGCGCCA GATCGTGAGC GATGCGGCGC TGGCCGCGCT GCTGGGCGCG GCGCCGCTCA ACGGCGACCT GTTTGCGCCC GTCGATCTCG ACGCCGCTGT GATTACCAAC CGCGACCTGC TGCACGCCTT CCGCCATCTC GCCTGGTACG GCGATCCGCC GCGCCGCATC AACTATGCGG CGCTCGACAC CGAAGAACTG GGGTCGGTGT ACGAAAGTCT GCTCGAACTG CACCCGACCA TCGCCTGGCG CGGCGCGGTT CCCGTCGTTG CCTTCGCCGC ACGCAGCGCC GAACGGCGCG CCACCGGCTC GCACTACACT CCGCCGGAGC TGGTGGCGCC GCTCGTGCAG CACGCGCTGG AGCCGGCGCT GCGGGCGCGT CTTGCGCCAT GCCCCACACC TGCCGAACGG GAAGCGGCGC TCCTTGGACT GACCGTGCTC GATCCGGCAT GCGGCAGCGG GCATTTCCTG CTGGCGGCGG CGCGGCATCT GGGGACCGAA CTGGCGCGCA TCCGCAGCGG CGACGCCGCC CCCGCCCCGG AGATCGTCCG TGACGCAGTG CGCGACGTGA TTGCCCACTG CCTGTACGGG GTGGACAAAA ATCCGCTGGC GGTCGAACTC TGCCGCGTCG CGCTCTGGCT GGAAGGGCAT GCGCGGGGCA GGCCGCTCAC CTTTCTCGAC CACCGCATCC GCTGCGGCGA TTCGCTCCTG GGGGTCGCCG ACCTGCAGGC GCTCGAAGCC GGCATTCCCG ATGACGCCTA CCGTCCGCTG GGAACCGACG ACCGCGCCCA CGCGCGGCAG GTCAAGGCGC GCAACGCGCG CGAGGCGCGC ATGGATCTCT TCCGCCACGG GTTCGTCACC GCGCCGCTGG CAGACCTGGC GGCGCAGATG CATCAGGTCG CCGCGATGCC GGATCGAACG GTGGAGCAGG TGCATGCCAA GAGCGCCGCA TACCGACGGG TGATCACCCA GGACGCCTAT CGCCGCCTGC GCCTGGCGTG CGACGTGTGG ACGGCGGCGT TCTTCCAATC CTTCGCACCC CCCCAGTCCC CCCCGCCAAC CCCCCACGCA CGCGGGGGGG GCATGGGGGT GGTGGGGGTG GCGCTGACGA CGATGGCGGT TCAGGAGGCG CTGACGCACG GCGCGCTGAG CGACCCGCGC CAGGGAGCGT TCGTGACCGT CACGCGCGAC GAGCGCGCCT TCTTCCACTG GTCGCTGGAG TTCCCGGACG CGGCGGCGGC AGGCGGGTTC GATGTCATCC TCGGCAACCC GCCGTTCATG GGGGGATTGC GCATCAGCGG CGTCGCGGGC GAAGCGTACC GGCGCTGGCT GGAAGCGGCG CTGGTGCCGT TCGGCGGCAC AGCCGACCTC TGCGCGGCGT TCTTCCGGCG GGCGTTCGCG CTGCTGCGTC CCGGCGGGCG GCTGGGGATG ATCGCCACCA ACACCATCGG GCAGGGGGAC ACGCGCGAAA GCGGGCTGAA GGTCATCCTG GCGCAGGGCG GGCGCATTGC GTTCGCCCGC CGCTTCGTGC GCTGGCCCGG ACAGGCGAGC GTCGAAGTCA ACCTGGTCGT CATTGAAGCG CCGCGCGCCC GCCGCACGCA GGAGGGGACT GGGGGAGACG GCGGCGCGCT GCTCGACGAC CACCCGGTTG CGGCGATCTC GTCGCGGCTC GATGCCGAAC CGGACGGCGA ACCGGCGCGC CTGCGCCAGA ACGACGGCAA GGCGTTCATC GGCGATTTCG TGCGTGGTCT CGGCTTCGTG CTGGAGGCGG CAGAGGCGGA GGCGCTGCTG GCGCGCGACC CGCGCAACGC TGACTGCCTG TTCCCCTACC TGAACGGCGA CGACCTGAAC ACCCATCCGG CGCAGCAGCC GGGGCGATGG GTGATCTGCT TCCACGACTG GGACCTGGCG CGGGCGCAGC AGTACCCCGA CCTGCTGCGG ATCGTGGAGG AGCGGGTGAA GCCGGAGCGG GAGGGGCTGC GTGGTCCGGG GGACGCGCGC AACCGCGCGG CCTGGTGGCA GTTCGGCGCC TACCGCGCGG GCATGCGTCA CGCCATCGCC CCGCTGCGCC GGGTGCTGGC GCGGAGTCGC ATCAGTGAGA TGCATGCGCC GGTGTTTGTT CCCAAGGGTT GGATATACAA TGAGCAACTG GTCGTCTTCG CCTTCGACGA CGACTATCAC TTCGCGCTGT TGCAATCCGG CGTGCACGAG GCGTGGGCGC GCCGCCAGGC GTCCAGTCTG CGCACCGATC TGCGCTACAC CCCCACCGAC TGCTTCGCCA CGTTTCCCTT CCCGCCGGCG GAGGATGCTG CTCCCGACCT GGCGCGGGTG CTGGCGCACC CGGCGTTCGC GCATGCGGCG CAGATCGGAG CGGCGTACCA CGAGCGGCGC CGGGAGGTGA TGCAGGCGCG CCGGATCGGG TTGACGAAAA CGTACAACCT GCTCCACGAC CCCGCCTGCC TTGATGCCGA CATTGCAGAC CTGCGGCGGC TGCACGCGGC GCTGGATGCG GCGATCCTGG CGTGCTACGG CTGGGACGAT CTCGATCCGG GGCACGATTT CCACGCGAAC GCGCGCGGGC AGACGCGCTT CGGCATGGCG CCGGCGGTGC AGCGCGCGGT GGTGCAGCGG CTGCTCGACC TCAACCTGGC AGTGGCGACG GGGCGGGTCT GA
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Protein sequence | MSHIHAPTPA IRLEGGLLGP DILDAALAGD LPGQQPRDFG LDGSRSLTDE IAGAFADAQA QWALFRRRLA RLPDDDPATA ITRDAWVIPF LSLLGYDLHA NPHPYAIDGA RFAISHRAGA ADDAPPVHIV GVRQDLGRVP PAPSRTGGVR MAPHVLVQEY LNRSEQVWGL VANGRTLRLL RNSTYLRRQA YVECDLAQIL DEQRFADFAA LYRLIHRTRL PQTAADARDC WLERYHQHAL EQGGRVRDRL RDGVEQALLI LANGFLAHPA NGALRAALRL PPPGEPVPDD VAAALYRQAL RIVYRVLFLL TAEDRGLISD DPHYAHYGVG RLRRLLTRRS AFTDHVDLWL GFQTLRQIVS DAALAALLGA APLNGDLFAP VDLDAAVITN RDLLHAFRHL AWYGDPPRRI NYAALDTEEL GSVYESLLEL HPTIAWRGAV PVVAFAARSA ERRATGSHYT PPELVAPLVQ HALEPALRAR LAPCPTPAER EAALLGLTVL DPACGSGHFL LAAARHLGTE LARIRSGDAA PAPEIVRDAV RDVIAHCLYG VDKNPLAVEL CRVALWLEGH ARGRPLTFLD HRIRCGDSLL GVADLQALEA GIPDDAYRPL GTDDRAHARQ VKARNAREAR MDLFRHGFVT APLADLAAQM HQVAAMPDRT VEQVHAKSAA YRRVITQDAY RRLRLACDVW TAAFFQSFAP PQSPPPTPHA RGGGMGVVGV ALTTMAVQEA LTHGALSDPR QGAFVTVTRD ERAFFHWSLE FPDAAAAGGF DVILGNPPFM GGLRISGVAG EAYRRWLEAA LVPFGGTADL CAAFFRRAFA LLRPGGRLGM IATNTIGQGD TRESGLKVIL AQGGRIAFAR RFVRWPGQAS VEVNLVVIEA PRARRTQEGT GGDGGALLDD HPVAAISSRL DAEPDGEPAR LRQNDGKAFI GDFVRGLGFV LEAAEAEALL ARDPRNADCL FPYLNGDDLN THPAQQPGRW VICFHDWDLA RAQQYPDLLR IVEERVKPER EGLRGPGDAR NRAAWWQFGA YRAGMRHAIA PLRRVLARSR ISEMHAPVFV PKGWIYNEQL VVFAFDDDYH FALLQSGVHE AWARRQASSL RTDLRYTPTD CFATFPFPPA EDAAPDLARV LAHPAFAHAA QIGAAYHERR REVMQARRIG LTKTYNLLHD PACLDADIAD LRRLHAALDA AILACYGWDD LDPGHDFHAN ARGQTRFGMA PAVQRAVVQR LLDLNLAVAT GRV
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