| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2503 |
|---|
| Symbol | |
|---|
| ID | 5209472 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | - |
|---|
| Start bp | 3094005 |
|---|
| End bp | 3094949 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640596108 |
|---|
| Product | anti-sigma-factor antagonist |
|---|
| Protein accession | YP_001276830 |
|---|
| Protein GI | 148656625 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
|---|
| TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.244324 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCTGGA CGCAACGCCA GATCAACACA TTCCTGTTTA TCCTCCTCCT GACAGGCGCC
CTGGTGGCGC TTATCGACGT GCTGACCCGC GACACGCCTC AGATGACGCG GATCGGGTAC
GCTTTCGCTG CTCTCTGCGC CGGAGGGTTG TTGATTGCGT ATCGGCGCGG ATGGGAGTAT
GCGCGCCATA CGCTGGCGCT TGCGATCATG CTGGCGGTTG CATTCTTCAC CAGTGAACCG
TATGTTTCGC AGCAGATGGA TCTGTTGCAC GCAGTTCCAA TGGTGGTGGC TCTGGTGCTC
ACCGGTCCCC GCTGGCTGTT GGTGAATGCG ATTCTCTTTC TCGTGATTAT GCTTGTCCGG
AGCGGGTGGA GCGGCGTCTA CACCTCGATC CCCAACCTGG TTGCCTACGG GGCGCTTGCG
GGCGGTATGA TCCTGAGCCG TCTGGCGGTC GACAACGCAC AGCGTCTGGA GGAAGCGCGT
CGCTTTGCCG AAGAAGAACG ACTGCGCACT GTTGAAGCGC TGGCGCTGGC GCAACAGCGC
GCCGATGAAC TGGCACAGCG CAATGCCGAA CAGAATCGGT TGCTCCAGCT CGTATCGGAA
CTGGAAACGC CCGCGATTGC GATTGCCGAT GGCGTCCTCC TTGCGCCGGT GGTGGGAAAT
CTCGATACGC GCCGTGCCCA GGCACTGAAC AAACGCCTGC TGGAAACAGT TGCGCATCGG
CGGACACGCC TCGTCATCCT CGATATTGCC GGTGTGACGC ACGTCGATAC ATCAGTCGCG
CAGAGCCTGG TTCAGGTCGC GCAGGGGTTG CGGTTGATCG GGTGCCGCGT CGCCATCAGC
GGGATGACGC CAGCAGTCGC CGCCACGCTT GCCTCCCTGA ACGCGACGCT TCCTGATATT
ATGACCTGTC GCTCGCCGCA GGATGCGTTG CTGCTGCATC CGTGA
|
|---|
| Protein sequence | MGWTQRQINT FLFILLLTGA LVALIDVLTR DTPQMTRIGY AFAALCAGGL LIAYRRGWEY
ARHTLALAIM LAVAFFTSEP YVSQQMDLLH AVPMVVALVL TGPRWLLVNA ILFLVIMLVR
SGWSGVYTSI PNLVAYGALA GGMILSRLAV DNAQRLEEAR RFAEEERLRT VEALALAQQR
ADELAQRNAE QNRLLQLVSE LETPAIAIAD GVLLAPVVGN LDTRRAQALN KRLLETVAHR
RTRLVILDIA GVTHVDTSVA QSLVQVAQGL RLIGCRVAIS GMTPAVAATL ASLNATLPDI
MTCRSPQDAL LLHP
|
|---|
| |