Gene RoseRS_2500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_2500 
Symbol 
ID5209469 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp3091400 
End bp3091972 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content65% 
IMG OID640596105 
ProductCMP/dCMP deaminase, zinc-binding 
Protein accessionYP_001276827 
Protein GI148656622 
COG category[F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0590] Cytosine/adenosine deaminases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.59246 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACAA ACGCACACGT CCTGACCATC ACGCTCCCCG ACTGGCTGCA ACGGCGTCTG 
GCGATGCCCG TGCATCTCCA TGACGACGAA TCGCGTATGC GCCTGGTCAT CGACCTGGCG
CGCGAGAATA TCACGCACGG CACGGGCGGT CCGTTCGCCG CCGCCGTCTT TCGTGCTGGC
GACGGTCTGC TGGTAGCTGC AGGGGTCAAC AGTGTCACAC GGTTGAACAA CGCGATGCTG
CATGCCGAGG TTGTGGCGCT GATGTTCGCC CAGGCGCGGG TGGGGTCCTA CTCGCTGCGC
GGCGCCGGTG CACCGTATGA ACTGGTGACA TCGTGCGAAC CGTGCGCTAT GTGCCTGGGC
GCCACGCTCT GGAGCGGCGT GCAGCGCCTG GTCTGCGGCG CGACCCGTGA TGATGCTGAG
CGGATCGGGT TTGATGAGGG TCCGGTGTTT GCCGAGTCGT ATGCGTACCT GGAGCGGCGT
GGCATCGCCG TTGTTCGCCA GGTGCTCCGC ACCGAGGCGG CAGACGTGCT CGACTGGTAT
CTGCGCAGCG GCGGGATCGT GTACAACGGC TAG
 
Protein sequence
MNTNAHVLTI TLPDWLQRRL AMPVHLHDDE SRMRLVIDLA RENITHGTGG PFAAAVFRAG 
DGLLVAAGVN SVTRLNNAML HAEVVALMFA QARVGSYSLR GAGAPYELVT SCEPCAMCLG
ATLWSGVQRL VCGATRDDAE RIGFDEGPVF AESYAYLERR GIAVVRQVLR TEAADVLDWY
LRSGGIVYNG