Gene RoseRS_2489 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_2489 
Symbol 
ID5209458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp3077436 
End bp3077864 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content64% 
IMG OID640596094 
Producthypothetical protein 
Protein accessionYP_001276816 
Protein GI148656611 
COG category[S] Function unknown 
COG ID[COG2947] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0016498 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0588103 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAAC GTTTCTGGTT GCTGAAAACC GAACCGGACT GCTACGCCTG GAGCGATCTG 
GAACGCGACG GTCGCACGGT ATGGGACGGC GTAGCCAACA ATGTGGCGCT CAAATACCTG
CGGGAGATGC AACCGGGAGA CGAGGCGCTG ATCTATCATA CCGGCGACGA GCGATGCGCC
GTCGGGCGGG CTGAGGTGAT CAGTGCACCC TACCCCGATC CGCAGCACAA CGACCCGCGC
ATGGTGGTGG TTGATATTCG CCCGCTGGCG CCGCTGCCGC GCCCGGTTTC CCTGACGGCG
ATCAAAGCCG ACCCGGCGTT CGCCGACTTT GCGCTCGTGC GTCAGTCACG TCTGTCGGTT
GTGCCGGTGA CCGAAGCGCA CTGGCGGCGA TTACTGGCGA TGGCGGGGAT GGAAAGCGAT
GCCGGTTGA
 
Protein sequence
MSKRFWLLKT EPDCYAWSDL ERDGRTVWDG VANNVALKYL REMQPGDEAL IYHTGDERCA 
VGRAEVISAP YPDPQHNDPR MVVVDIRPLA PLPRPVSLTA IKADPAFADF ALVRQSRLSV
VPVTEAHWRR LLAMAGMESD AG