| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2483 |
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| Symbol | |
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| ID | 5209452 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 3071103 |
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| End bp | 3073289 |
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| Gene Length | 2187 bp |
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| Protein Length | 728 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640596088 |
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| Product | dehydrogenase-like protein |
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| Protein accession | YP_001276810 |
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| Protein GI | 148656605 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5322] Predicted dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0417165 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.165062 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAGA TCCTTATCAT TCATCTCGGC GAAGGCGAAA TGCTCTTGCC GGTCACCTTT
TTAGACCAGG ATGTCGAGGT GCGGCGCGTC GGCTGCGGCG GCGACGTGGC GCGCGCCCGG
GCGTTGATCG CCGAATATGA CGGCGCTGTT GATGCGATTG GGCTGGAAGG CATGCCAGCG
GTGTTGCGTC TGGGGAGCGC GCAGGTGCAG CATGCCATTG GCGCGGAACT GCCCGCCGTC
GCACGGGTGA CCCCAGTTGT GGATGGCAGC GGCGTGCGCC CCGAACTTGA ACGCTGGGGC
GTCATCCTTG CCGAGCGCGC GCATCCGCTG ATCTTCAACC ACAAACGTGT ACTCTTTGCC
CCAGGCGTTA ATCACGAAGG GCTGGCTCAG GCGCTGACGC GGCGCAGTTC GGCAATACGC
TTCGCCGATC CGCAGCTGTT CTTTGGTCTG CCCGATGCAC CCGGAGTCGG CAGTGCGCAA
ACCCTCGACC AGGCAGCCGC ACCGACTCTG GAGGCGCTCA AGGAGGCGTC GTTCGAGACG
ATTGCTGGCA TCACCGGTGC GCCGCACCAC CAGGGCAGTT TTGTCTGGGC GGACATTCTG
GCGGGCAATA TCGCCGCCAT TCGCCGGTTC GCGCCTGAAC GGTTGGACCG GAAAATGGTG
ATCGTCGAGT CGGCGAGCGA CGAGGACATC GCCGACCTGC GCGCACGCGG CGTCGAAACC
CTGATCACGC TGATGCCGTC ACTTCAGGGC AAAGGGGAAA TTGCGCGCTA TCCGGCAGCC
ACGATCGAAG CGCTGCTCGT CGCGCTTCGC CCCGATCCGC AGGCGCCGCT CACCGAGGAT
ACCTACCTCG ACCTGCTGGC GGATCTCGAC TGGGCGCCCG CCGTCGTGAC CCTGCAACCA
GAGGCGGCCG GCGTCAACAA GTTCGCCTTC GTCATCCACC CGTTGAGCGT CAGGTTCATC
CACGACTATC CGCCGTTCTA CTGGACGCGC TACGTTCCGG ATACGATCGT CGAAGCGGCG
GCGGCGTATG TGCCGCCGAT CTATGTCGGG AAGATCACCG GCGGACGTTC GCCGACGACC
GGGCAGCGCA TCGAGGGGTA TCTGATCTCG CTTGGCGCAA CGCCGCGTCA GATGATGAAG
CACAGCCCGC GTTTCACCTA CAATCTGCTC AATCAGGCGG CGCACCTCGC CGAACGCCTC
GGCGCACGCA TCATGGGGCT GGGCGCCTTT ACCAGCGTTG TCGGAGATGC GGGCATTACT
GTTGCCAACG AAGCGGATAT CGCCATCACC AGCGGCAACA GTCTGACCGT CGCCGCAACC
CTGGAAACTG CCAAGATTGC AGCGCGCATG ATGGGATATC GCGATCTGAG TCGTGGGCGG
ATCATGGTCA TTGGCGCCAC CGGTTCGATC GGTTCCGCCT GTGCGCGACT GGCGGCGCAG
GCGACGAAGG ATGTGGCGCT GGTCTCGATC GAGCCGGAGA AACTGATCGA CCTGAAACGC
CTGATCGAGC GCGAAACGCC AGGGGCGCGG GTGGTGATTG CGACCCATGC CAATGATCTG
GCGGGCGAGT GCGACCTGAT CATCACGGCG ACCTCCGCCT TTGGTCAGCG CGTCCTTGAT
GTGACGGAGT GCAAGCCGGG CGCCATCATC TGCGATGTGG CGCGCCCGCC GGACATCAAC
CCGGCGGAAG CGGCGCTGCG CCCTGATGTG CTGGTGATCG AGAGCGGCGA GGTGCTGATC
CCCGGTGACG TTGAAATCGG GTATGATATT GGCCTGCCGC CCAAGACGGT CTACGCCTGT
CTGGCGGAAA CGTCGCTGCT GGCGATGGAA GGGCGTTTCG AGGATTACAC GCTGGGGCGC
AATATCTCGC CCGAGCGGGT GAAAGAGATC TACCGGCTCT TCCGCAAGCA TGGCTACCGC
CTGGCGCCGC TGCGTTCGTT CGAGGAATAT ATCACCGAAG AGCAGATCAT GCACAAGCGC
AGACTGGCGG AGGAGTTGCG CGCCGATCCC GAATTGTTCG CGCGGCGCAA AGCGGAAGCG
AAGGAACGCC TGAAATCGAT CCCGGAGATG GCGAAGGGCG TGCGCGCTGC ACGACGCAGC
AAACATTCCG CAGCGTGGGG CTGGGCGGGA GTCGGCGCAG TCGCGCTGAG CCTGATCGCG
CTGCGACGCC AGGCACGGAT GCAGTAG
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| Protein sequence | MKKILIIHLG EGEMLLPVTF LDQDVEVRRV GCGGDVARAR ALIAEYDGAV DAIGLEGMPA
VLRLGSAQVQ HAIGAELPAV ARVTPVVDGS GVRPELERWG VILAERAHPL IFNHKRVLFA
PGVNHEGLAQ ALTRRSSAIR FADPQLFFGL PDAPGVGSAQ TLDQAAAPTL EALKEASFET
IAGITGAPHH QGSFVWADIL AGNIAAIRRF APERLDRKMV IVESASDEDI ADLRARGVET
LITLMPSLQG KGEIARYPAA TIEALLVALR PDPQAPLTED TYLDLLADLD WAPAVVTLQP
EAAGVNKFAF VIHPLSVRFI HDYPPFYWTR YVPDTIVEAA AAYVPPIYVG KITGGRSPTT
GQRIEGYLIS LGATPRQMMK HSPRFTYNLL NQAAHLAERL GARIMGLGAF TSVVGDAGIT
VANEADIAIT SGNSLTVAAT LETAKIAARM MGYRDLSRGR IMVIGATGSI GSACARLAAQ
ATKDVALVSI EPEKLIDLKR LIERETPGAR VVIATHANDL AGECDLIITA TSAFGQRVLD
VTECKPGAII CDVARPPDIN PAEAALRPDV LVIESGEVLI PGDVEIGYDI GLPPKTVYAC
LAETSLLAME GRFEDYTLGR NISPERVKEI YRLFRKHGYR LAPLRSFEEY ITEEQIMHKR
RLAEELRADP ELFARRKAEA KERLKSIPEM AKGVRAARRS KHSAAWGWAG VGAVALSLIA
LRRQARMQ
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