| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2407 |
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| Symbol | |
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| ID | 5209376 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 2978756 |
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| End bp | 2979418 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640596012 |
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| Product | TrkA domain-containing protein |
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| Protein accession | YP_001276734 |
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| Protein GI | 148656529 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0569] K+ transport systems, NAD-binding component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.163912 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATGTGA TTATTGTCGG CGGCGGCAAA ATCGGGCGCA ACCTGGCAAT GTTTCTGACG
GCTGAAGGGC GTCACGCGAT CACATTGGTC GAAAAACAGG AACAGGTGGC GCATTCGCTG
ATGCGCATGC TCCCCGATAT CCGGGTGATC GAAGGGGATG GGTGTGATCC TTCGGTGCTG
CGCGATGCGG GCGCGGAGTT TGCCGATGCA GTTGCAGCGG TCACCGGCGA CGACGAGGAT
AATCTGGTCA TCGCGGTGCT GTGCAAGCGC GAGTTCCGCG TGGGTCGCGT TGCAGCACGG
ATCAATAATC CAAAGAACGC CTGGCTGTTC ACCCGCCGCA TGGGGGTTGA CCTGCCGATC
GATACGGCGC AGACGATCGG ACGCGGGCTG GAGGCGGATA TCAATCTCGG GGCGATTGTT
CAGTTGACCC GCCTGCGTGA GGGGCGAATC TCACTCATCG AGTTTACCGT TTCCGCTGAG
TCGAGCGCGG TCGGAAAGAA TGTTGCGTCG CTGCATTTGC CCCCCGATTG TCTGCTGACC
GCGATCCTGC GCGGTGACGA CGTCATTCTG CCGTCAGGCG AAACCGTCAT CCAGGCGGGG
GATCAGGTGA TTGCCCTGGC ATATCGTGAC CGCGAGGCGG CGCTGTCGGA GCGGTTCCAG
TAA
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| Protein sequence | MNVIIVGGGK IGRNLAMFLT AEGRHAITLV EKQEQVAHSL MRMLPDIRVI EGDGCDPSVL
RDAGAEFADA VAAVTGDDED NLVIAVLCKR EFRVGRVAAR INNPKNAWLF TRRMGVDLPI
DTAQTIGRGL EADINLGAIV QLTRLREGRI SLIEFTVSAE SSAVGKNVAS LHLPPDCLLT
AILRGDDVIL PSGETVIQAG DQVIALAYRD REAALSERFQ
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