Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_2390 |
Symbol | |
ID | 5209359 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 2955763 |
End bp | 2956820 |
Gene Length | 1058 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640595995 |
Product | transposase, IS4 family protein |
Protein accession | YP_001276717 |
Protein GI | 148656512 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.082083 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGTAAGT ATCGATCCAT TATCGAAAAT CCGGAGAAAT TACGCTCTAT GACCGGACTG ACCGTTGAAG AGTTCCACGC GCTGGTTCCG ATCTTCCACG CCGCATTTGA AGCGTATATG AAACGTCGCA CGATTGATGG CCGCGTCCGA TATTGTCGTC GCTACGTCTC GTATGCAAAC TCGCCGCTTC CGACAACAGA AGATAAATTG CTCTTTATTT TGACCTACTT AAAACAAAAC CCAACGCAAG TGATGCACGG ACACCTCTTT CAAATGAGCC AATCAAACGT AAGCAAATGG GTGCATCTTT TGCACGGAGC GCTGAACTAT GCGCTTTCAC AGCAAAATCT CCTGCCTGCG CGCACTGCCG ACGACCTGGC GAGGCGATTG CAGGAAGAAC CGTCGTGTGA AGAACCGTCG TGTGAAGAAC CGTCGTGTGA AGAACCGTCG TGTGAAGAAC CGTCGTGTGA AGAACCGTCG TGTGAAGAAC CGTCGTGTGA AGAACCGTCG CATGCGACAA AAGCGCCCCC CTTTTTATCC ATGACGGCGT AGAACGTCCC ATTCGCCGTC CAAGCGACAA AGTCGACCGG GAGTTGTATT ACAGCGGTAA GAAGAAACGA CATACGCTTA AGAACGTTCT CATCATTGAT GAGTTTGGCT CTATTCACTT TTTGAGTGAC ACCTACGAAG GAAGGGTCCA CGATAAATGT ATTGCGGATG AAGCGGGATA CACCCTTCCA AACGCGAGCA TTCTCTATCA AGACGCCGGA TTTCAAGGAT TTACCCTGCC TGGCGTCCAG ATTATGCAGC CAAAGAAGAA GCCGCGCAAT GGAACCCTCA CGCCGCAGGA AAAGGAGGAA AACCGGCGTA TCTCATCCGT TCGCGTTCGT ATTGAACATG TTATCGGCGA TATCAAGCGG TATCGAATCA TTCACGACAT TATCCGCTTC AGTTGTTCCG AATTTCGGGA TATGGTCATG GAAACATGTT GCGGGCTGCA TAACTTCCGA ATTTGGCTGA AACGCAAAAA GCAGTCCAAA AATCAAAACG AATCTTGA
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Protein sequence | MCKYRSIIEN PEKLRSMTGL TVEEFHALVP IFHAAFEAYM KRRTIDGRVR YCRRYVSYAN SPLPTTEDKL LFILTYLKQN PTQVMHGHLF QMSQSNVSKW VHLLHGALNY ALSQQNLLPA RTADDLARRL QEEPSCEEPS CEEPSCEEPS CEEPSCEEPS CEEPSCEEPS HATKAPPLFI HDGVERPIRR PSDKVDRELY YSGKKKRHTL KNVLIIDEFG SIHFLSDTYE GRVHDKCIAD EAGYTLPNAS ILYQDAGFQG FTLPGVQIMQ PKKKPRNGTL TPQEKEENRR ISSVRVRIEH VIGDIKRYRI IHDIIRFSCS EFRDMVMETC CGLHNFRIWL KRKKQSKNQN ES
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