Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_2384 |
Symbol | |
ID | 5209353 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 2948222 |
End bp | 2948992 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640595990 |
Product | glucose-1-phosphate cytidylyltransferase |
Protein accession | YP_001276712 |
Protein GI | 148656507 |
COG category | [J] Translation, ribosomal structure and biogenesis [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
TIGRFAM ID | [TIGR02623] glucose-1-phosphate cytidylyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGTCG CTATTCTCGC AGGTGGGGTC GGATCGCGCC TCTCGGAGGA GACCGAAGTT AAACCGAAGC CAATGGTCGA GATCGGCGGT CGCCCGATCC TGTGGCACAT CATGATGCAC TACTCCTGTT ATGGCTTCAA GGACTTCGTC ATCGCCCTCG GTTACAAAGG GGAAGTCATC AAGAAGTACA TGGTTGATTA CTGCTCGCTC AACAGCAATC TGAAGGTCAA CCTGCGCTCC GGTGTCGTTG AGATGAATGG CGGCTATCGT CCGGACTGGA ATGTGGAATT GATCGATACC GGCATTCCGA CGAATACCGG CGGGCGGATC AAGCGCCTAG CGCCGTACCT CGGCAATGAG ACCTTTATGC TGACCTGGGG CGATGGTGTT TCGGATGTCA ATCTGCATGC CCTGCTCGCA TTCCACCGCT CACACGGCAA ACTGGCAACG CTGACCGCCG TGCGTCCACC GGCGCGCTTT GGGCACCTGG AACTGGACGG GGATCGGATC ACCGAGTTCA ACGAAAAACC GCAGACCGGC GAGGGATGGA TCAACGGCGC TTTCTTTGTG CTCGAACCGG CAGTGTTCGA CTATATCGAC GGCGACGATA CCGCCTGGGA GCGTGAGCCG TTGCAGCGCC TGGCGCGCGA AGGGCAACTG ATGGCATACA AACACACCTC CTTCTGGCAG TGTATGGATA CGCTGCGCGA TAAAAAGTTG CTCGAAAGTC TCTGGCAAAC CGGCAAAGCA CCCTGGAAGA TCTGGGAGTA G
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Protein sequence | MKVAILAGGV GSRLSEETEV KPKPMVEIGG RPILWHIMMH YSCYGFKDFV IALGYKGEVI KKYMVDYCSL NSNLKVNLRS GVVEMNGGYR PDWNVELIDT GIPTNTGGRI KRLAPYLGNE TFMLTWGDGV SDVNLHALLA FHRSHGKLAT LTAVRPPARF GHLELDGDRI TEFNEKPQTG EGWINGAFFV LEPAVFDYID GDDTAWEREP LQRLAREGQL MAYKHTSFWQ CMDTLRDKKL LESLWQTGKA PWKIWE
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