Gene RoseRS_2378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_2378 
Symbol 
ID5209347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp2942221 
End bp2943216 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content57% 
IMG OID640595984 
Productglycosyl transferase family protein 
Protein accessionYP_001276706 
Protein GI148656501 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATCAG AAACTGACCG ACTGCGCGTG AGCGCAGTTA TCACAACGTA CAATGCGGCA 
CATTTCGTCG GGGAGGCTAT CGAGAGCGTT CTGGCGCAGA CACGGCTTCC AGACGAGATT
GTGGTCATCG ATGATGGATC GACCGATGAT ACTGCCCGAG TCGTAGCACG CTACGCCTCA
CATGGAGTGC GCTACGTCTA TCAGCAAAAC GGAGGACCTG GATCGGCGCG TAATCGCGGC
ATTCGGGAAA CGAGCGGCGA TCTGGTTGCA TTCCTCGATG CCGATGATCT CTGGTTGCCG
CCAAAGACGG AGATGCAACT GGCATATGTC GCCACACACC CCGATGTCGC CCTGGTCAGC
TGTGATCGCT GGGTGTGGAA GATCGAAAAG GAACGTCGCT ATCTAGAACG CTTCGGTCCT
CATTATAACC TCGATGCGCG TCGCGAGGTG ATGGTGCGCA ATATCGTCGG TAATCCATCA
CAGGTGATAG CGCGCCGGGA TGCGCTGATT GCAGCGGGGG GCTTTGACAC AACGATGCGT
TGGGCAGAGG AATGGGATCT GTGGGTGCGG ATTGCGGCGC GTGGTTCGCT CGGATTCGTG
CATCAACCGC TCAGTGTGTA CCGCTGGCAC AGCGGCGGGT TGGCCCATGA GAACATGTGG
CGTCGTTTGT CGGGACAACA GGCGATCGCA TTTCGTGCGA TCAGCGCCTT TCAACCGGTC
TGGTGGCGTC CACTGCTGCT CTTGCGCGCC TGGACTGCTG TTGAGGTGAT GCGCGCTACT
TATGCGGTAG ATTTTGATAT GCCGCGCACG ACACAAGTCT ATCACGCGTT ACGCGTCCTC
ATCTATCCGT TTGAGAATCC CCAGGAACAG GTGCGCGTGG CGCTCCGTGG ATTGCTTGGC
AAGAAATGGT ATACCGCACT GGTAAATCGA ACGCCGCTCG CCCGATTGCG GTTGCGGGGT
GCACAACCTG TAAATCCGGA ACGGAGACAG ATCTGA
 
Protein sequence
MSSETDRLRV SAVITTYNAA HFVGEAIESV LAQTRLPDEI VVIDDGSTDD TARVVARYAS 
HGVRYVYQQN GGPGSARNRG IRETSGDLVA FLDADDLWLP PKTEMQLAYV ATHPDVALVS
CDRWVWKIEK ERRYLERFGP HYNLDARREV MVRNIVGNPS QVIARRDALI AAGGFDTTMR
WAEEWDLWVR IAARGSLGFV HQPLSVYRWH SGGLAHENMW RRLSGQQAIA FRAISAFQPV
WWRPLLLLRA WTAVEVMRAT YAVDFDMPRT TQVYHALRVL IYPFENPQEQ VRVALRGLLG
KKWYTALVNR TPLARLRLRG AQPVNPERRQ I