| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2342 |
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| Symbol | |
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| ID | 5209309 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 2895797 |
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| End bp | 2896177 |
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| Gene Length | 381 bp |
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| Protein Length | 126 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640595947 |
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| Product | large conductance mechanosensitive channel protein |
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| Protein accession | YP_001276671 |
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| Protein GI | 148656466 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1970] Large-conductance mechanosensitive channel |
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| TIGRFAM ID | [TIGR00220] large conductance mechanosensitive channel protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.998505 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGTTCGAGG GTTTCAAAAC GTTCGTCATG CGCGGGAATG TGATCGACCT GGCAGTCGGC
GTGGTTATCG GTACTGCGTT TAGCGCCGTC GTCAACTCGC TGGTCAACGA TATTCTGATG
GCAATTGTCG CCACCCTGAT CGGTCAGCCG GATTTTTCCG ACGTTCTGGT GTTCGGTGCA
GTACGACTCG GCGCATTCAT CACCACCATT GTCAATTTTC TGATCATCTC TGCTGCGCTC
TACTTCCTCG TCGTTGTGCC AATCAACAAA CTCTCGGAAT TCACAAGGAG AAATGAACCG
CCTCCTGCTC CGCCAGCACC GTCCGCAGAA GAGAAACTTC TGACCGAAAT TCGTGACCTG
CTGCGACAAA ATATAACCTG A
|
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| Protein sequence | MFEGFKTFVM RGNVIDLAVG VVIGTAFSAV VNSLVNDILM AIVATLIGQP DFSDVLVFGA
VRLGAFITTI VNFLIISAAL YFLVVVPINK LSEFTRRNEP PPAPPAPSAE EKLLTEIRDL
LRQNIT
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